Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03060 and BL01982
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_03060.1.5803.seq
# -bsequence dna-align/BL01982___proH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03060-BL01982___proH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03060-BL01982___proH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03060
# 2: BL01982___proH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 844
# Identity: 331/844 (39.2%)
# Similarity: 331/844 (39.2%)
# Gaps: 410/844 (48.6%)
# Score: 1008.5
#
#
#=======================================
BSNT_03060 0 -------------------------------------------------- 0
BL01982___pro 1 ATGGCAGAGGGAATGATCTCAGGCATCGTTCAATCCAAAAAACTGCCTGC 50
BSNT_03060 0 -------------------------------------------------- 0
BL01982___pro 51 TTCGCAAATCTATGTTACAAACCACACGAACCACCGGCGTTTAGAAGAAC 100
BSNT_03060 0 -------------------------------------------------- 0
BL01982___pro 101 TCCAGCAGAAATATGGAATACAAGGCGTCAAAAAAGAACAACTTGACTAT 150
BSNT_03060 0 -------------------------------------------------- 0
BL01982___pro 151 CAGAACATCGATTGCTTCATCCTGGCGATGAAGCCGAAAGATGCAGAGGG 200
BSNT_03060 0 -------------------------------------------------- 0
BL01982___pro 201 CGCTCTTAATTCCATGAAACCGCATATCAAACCCCATCAGCTTATCGTGT 250
BSNT_03060 0 -------------------------------------------------- 0
BL01982___pro 251 CAGTTTTAGCTGGCATATCAATATCATTTATTGAAAACACGCTGCACGAC 300
BSNT_03060 1 ---------------------ATG------------------ATTGGCGC 11
||| ||.|||||
BL01982___pro 301 ATGCAGCCGGTCATCAGAATCATGCCTAATACCTCAAGTGCAATCGGCGC 350
BSNT_03060 12 TTCTGCAACAGCTATTGCCCTTGGCAAATATGTGTCGGAAGACCTG--AA 59
.||||||||.||.||.|||...||.|...||||..|||..||.||| ||
BL01982___pro 351 ATCTGCAACCGCCATGGCCGAAGGAAGCCATGTAACGGCCGATCTGTCAA 400
BSNT_03060 60 GAAGCTGGCCGAAGC-ATTGCTCGGATGCATGGGCGAAGTCTATACAATC 108
.||.| .||||.| |.||||...|||||||||.|||||||||.|.|||
BL01982___pro 401 AAACC---GCGAAACAACTGCTTCAATGCATGGGAGAAGTCTATTCCATC 447
BSNT_03060 109 CAAGAAAATCAAATGGATATATTCACCGGAATTGCAGGCAGCGGCCCCGC 158
.||||||...|||||||.||.|||||.||.|||||.||||||||.||.||
BL01982___pro 448 GAAGAAAGCAAAATGGACATTTTCACTGGCATTGCCGGCAGCGGGCCTGC 497
BSNT_03060 159 GTATTTTTATTATTTAACGGAATTCATTGAAAAGACAGGCGAGGAAGCGG 208
.||.|||||||||||||.|||...|||.|||| |.||| |||..||.
BL01982___pro 498 TTACTTTTATTATTTAATGGAGCACATCGAAA----AAGCG-GGAGCCGA 542
BSNT_03060 209 GCCTCGAT------AAACAGTTATCTCGAAG---CATCGGCGCACAGACA 249
|.||.||| ||| |.|||.| ||| .||||||||.||||||
BL01982___pro 543 GGCTGGATTAAGCCAAA-AATTAAC---AAGGGAAATCGGCGCGCAGACA 588
BSNT_03060 250 CTTTTAGGTGCCGCAAAAATGCTCATGGAAA-----CAGGAGAACATCCT 294
.|.|||||.|||||.||||||||..|||||| .|||| .|||.|
BL01982___pro 589 TTGTTAGGCGCCGCCAAAATGCTGTTGGAAAGCCCTGAGGA-TACAGC-- 635
BSNT_03060 295 GAGATCTTAAGAGATAATATCACGTCACCTAACGGAACGACAGCAGCGGG 344
.|.|||.|| |||.||.|||||.||.||||||||.|||||.||.||.||
BL01982___pro 636 -TGTTCTCAA-AGACAACATCACTTCCCCTAACGGTACGACTGCCGCCGG 683
BSNT_03060 345 GCTGCAAGCCTTGAAAAAAAGCGGCGGCGGAGAAGCGATTTCTCAAGCGA 394
..|..|.||||||.||.||||||||||.||.||||||||....||.|||.
BL01982___pro 684 TTTAAAGGCCTTGGAAGAAAGCGGCGGAGGCGAAGCGATCGAACAGGCGG 733
BSNT_03060 395 TAAAGCATGCGGCTAAGCGTTCAAAGGAA--ATCAGCGAAGGTATCGA-- 440
|.||.||.||.||.||.||.||.|| || |||| ||.||||
BL01982___pro 734 TCAAACAAGCCGCAAAACGATCCAA--AACGATCA------GTCTCGAAC 775
BSNT_03060 441 ---AAAAACT----GCAGCGCCGCTATCAGGAGTGATAAAGTGA 477
||.||.| ||||| |||||.|
BL01982___pro 776 TGGAACAATTAGTCGCAGC------------------AAAGTAA 801
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