Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03017 and BL01989
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence dna-align/BSNT_03017.1.5803.seq
# -bsequence dna-align/BL01989.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03017-BL01989.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03017-BL01989.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03017
# 2: BL01989
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 158/226 (69.9%)
# Similarity: 158/226 (69.9%)
# Gaps: 17/226 ( 7.5%)
# Score: 539.5
#
#
#=======================================
BSNT_03017 1 ATG---ACGGTTAGCATACAA-ATGGCAGGAAACCTGTGGAAAGTCCACG 46
||| ||.|||..|| .||| ||||||||||||.||||||||.|....|
BL01989 1 ATGAATACTGTTGTCA-CCAATATGGCAGGAAACGTGTGGAAAATATTAG 49
BSNT_03017 47 TCAAAGCCGGCGACCAAATCGAAAAGGGCCAGGAGGTAGCCATTTTGGAA 96
|.|||||.||.|||.|||||||||||||.|||||.||.||||||||.|||
BL01989 50 TGAAAGCGGGGGACAAAATCGAAAAGGGGCAGGAAGTCGCCATTTTAGAA 99
BSNT_03017 97 TCGATGAAAATGGAAATCCCGATCGTTGCAGATAGAAGCGGAATCGTAAA 146
||||||||.|||||.||.|||||.||.||.||.|....|||||..||.||
BL01989 100 TCGATGAAGATGGAGATTCCGATTGTCGCCGAAACGGCCGGAACAGTCAA 149
BSNT_03017 147 AGAAGTCAAAAAAAATGAAGGAGACTTTGTAAATGAAGGAGACGTACTGC 196
|...||||.|||.||.|||||.||.||||...|||||||.||.||..|..
BL01989 150 AACCGTCAGAAAGAACGAAGGTGATTTTGCCGATGAAGGGGATGTCTTAT 199
BSNT_03017 197 TCGAACTGAGCAATTCCACTCAATAA 222
|.||.|| |||||||
BL01989 200 TGGAGCT------------TCAATAA 213
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