Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02085 and BL01996

See Amino acid alignment / Visit BSNT_02085 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:34
# Commandline: needle
#    -asequence dna-align/BSNT_02085___yjlD.1.5803.seq
#    -bsequence dna-align/BL01996___yjlD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02085___yjlD-BL01996___yjlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02085___yjlD-BL01996___yjlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02085___yjlD
# 2: BL01996___yjlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1179
# Identity:     969/1179 (82.2%)
# Similarity:   969/1179 (82.2%)
# Gaps:           0/1179 ( 0.0%)
# Score: 4005.0
# 
#
#=======================================

BSNT_02085___      1 ATGTCAAAACATATTGTCATTCTAGGCGCTGGTTATGGCGGAGTTCTTTC     50
                     ||||||||||||||.||||||.|||||||||||||.||||||.|.||.||
BL01996___yjl      1 ATGTCAAAACATATCGTCATTTTAGGCGCTGGTTACGGCGGATTACTGTC     50

BSNT_02085___     51 TGCTCTAACAGTTCGCAAACATTACACAAAAGAACAAGCACGCGTGACAG    100
                     |||||||||||||||||||||.||||||||||||.|||||...||.||||
BL01996___yjl     51 TGCTCTAACAGTTCGCAAACACTACACAAAAGAAGAAGCAAAAGTCACAG    100

BSNT_02085___    101 TGGTAAACAAATACCCTACTCACCAAATCATTACGGAATTACACCGCCTT    150
                     ||||.|||.||||.||.||.||.||||||||.||||||||.|||||||||
BL01996___yjl    101 TGGTTAACCAATATCCGACACATCAAATCATCACGGAATTGCACCGCCTT    150

BSNT_02085___    151 GCTGCAGGCAACGTGTCTGAAAAAGCGGTTGCAATGCCATTAGAAAAACT    200
                     |||||.|||||||||||.|||.|.||.|||||.|||||..|.|.|||.||
BL01996___yjl    151 GCTGCGGGCAACGTGTCAGAACAGGCAGTTGCGATGCCGCTTGCAAAGCT    200

BSNT_02085___    201 TTTCAAAGGCAAAGACATTGATCTTAAAATTGCGGAAGTAAGTTCTTTCT    250
                     |||||||||.||||||||.|||||||||||.||..||||.|..|||||||
BL01996___yjl    201 TTTCAAAGGAAAAGACATCGATCTTAAAATCGCCAAAGTCAACTCTTTCT    250

BSNT_02085___    251 CTGTTGATAAAAAAGAAGTTGCGCTTGCTGACGGTTCTACATTAACTTAC    300
                     |.|||||.|||||||||||.||.|||.|||||||.|||||..|.||.||.
BL01996___yjl    251 CAGTTGACAAAAAAGAAGTCGCTCTTTCTGACGGCTCTACCCTGACATAT    300

BSNT_02085___    301 GATGCGCTTGTTGTAGGTCTTGGTTCGGTAACGGCTTACTTCGGCATCCC    350
                     ||.||.|||||.||.|||||||||||.||.||.||||||||||||||.||
BL01996___yjl    301 GACGCACTTGTCGTCGGTCTTGGTTCTGTCACTGCTTACTTCGGCATTCC    350

BSNT_02085___    351 AGGTCTTGAAGAAAACAGCATGGTATTGAAATCTGCTGCTGATGCGAACA    400
                     .||.||||||||||||||||||||..|.||||||||....|||||.||||
BL01996___yjl    351 GGGACTTGAAGAAAACAGCATGGTGCTCAAATCTGCAAACGATGCAAACA    400

BSNT_02085___    401 AAGTCTTCCAGCATGTTGAAGATCGTGTGCGCGAGTACTCTAAAACGAAA    450
                     ||.|||||.|||||||||||||.||.||||||||.|||.|.|||||||||
BL01996___yjl    401 AAATCTTCAAGCATGTTGAAGAGCGCGTGCGCGAATACGCGAAAACGAAA    450

BSNT_02085___    451 AATGAAGCAGATGCAACAATCCTTATCGGCGGCGGCGGCTTAACAGGCGT    500
                     ||.|||||.|||||.||.|||.|.||||||||||||||..||||||||||
BL01996___yjl    451 AACGAAGCTGATGCTACGATCTTAATCGGCGGCGGCGGACTAACAGGCGT    500

BSNT_02085___    501 TGAGCTTGTTGGTGAGCTTGCTGACATCATGCCGAACCTTGCGAAAAAAT    550
                     .||||||||.|||||.||.||.||.||||||||||.||||||||.||..|
BL01996___yjl    501 CGAGCTTGTCGGTGAACTCGCCGATATCATGCCGAGCCTTGCGAGAAGCT    550

BSNT_02085___    551 ACGGCGTAGACCATAAAGAAATCAAATTGAAACTTGTTGAAGCAGGTCCG    600
                     ||||.||.||.|..|.|||||||||..||||.|||||||||||.||||||
BL01996___yjl    551 ACGGTGTCGATCCGACAGAAATCAAGCTGAAGCTTGTTGAAGCCGGTCCG    600

BSNT_02085___    601 AAAATCCTTCCTGTTCTTCCGGATGATCTTATCGAACGTGCGACTGCAAG    650
                     ||||||||.||.||||||||||||||.||.||||||||||||||....||
BL01996___yjl    601 AAAATCCTGCCGGTTCTTCCGGATGAGCTGATCGAACGTGCGACAAAGAG    650

BSNT_02085___    651 CCTTGAAAAACGCGGCGTTGAGTTCTTAACAGGTCTTCCTGTTACAAATG    700
                     |||||||||||||||||||||.|||||.|||||.||.|||||.|||||||
BL01996___yjl    651 CCTTGAAAAACGCGGCGTTGAATTCTTGACAGGACTGCCTGTCACAAATG    700

BSNT_02085___    701 TAGAAGGAAACGTAATTGATCTGAAAGACGGATCTAAAGTTGTTGCCAAC    750
                     |||||||||||||..|||||.|||||||||||...|||.|||||.|.||.
BL01996___yjl    701 TAGAAGGAAACGTTGTTGATTTGAAAGACGGACAAAAAATTGTTACAAAT    750

BSNT_02085___    751 ACATTTGTTTGGACTGGCGGCGTACAAGGTAACCCATTAGTCGGTGAATC    800
                     ||||||||.|||||.|||||.||.|||||.||.||..|..||||.|||||
BL01996___yjl    751 ACATTTGTCTGGACCGGCGGTGTTCAAGGCAATCCGCTGATCGGCGAATC    800

BSNT_02085___    801 AGGCCTAGAAGTGAACCGCGGACGCGCGACTGTAAATGACTTCCTGCAAT    850
                     |||.||.|||||.||||||||||||||.||||||||.||||||||.||||
BL01996___yjl    801 AGGTCTTGAAGTCAACCGCGGACGCGCAACTGTAAACGACTTCCTTCAAT    850

BSNT_02085___    851 CTACATCTCATGAAGATGTATTCGTTGCTGGAGACAGCGCAGTTTACTTC    900
                     |||||||.||||||||.||.||.|||||.||.||||||||.|||..||||
BL01996___yjl    851 CTACATCACATGAAGACGTGTTTGTTGCAGGGGACAGCGCCGTTGTCTTC    900

BSNT_02085___    901 GGTCCAGACGGCCGTCCATACCCGCCAACTGCACAAATCGCATGGCAAAT    950
                     |||||.||.||||||||.|||||.||.||.||.|||||||||||||||||
BL01996___yjl    901 GGTCCGGATGGCCGTCCGTACCCTCCGACAGCTCAAATCGCATGGCAAAT    950

BSNT_02085___    951 GGGTGAGCTGATCGGTTACAACCTATTTGCTTACCTGGAAGGCAAAACGC   1000
                     |||.|||||||||||.||||||||.|.|||.|||.|.|||..||||.|..
BL01996___yjl    951 GGGCGAGCTGATCGGCTACAACCTGTATGCATACTTAGAAAACAAATCAA   1000

BSNT_02085___   1001 TTGAAACATTCAAGCCAGTAAACTCTGGTACACTTGCAAGCCTTGGACGC   1050
                     |.|..||.||||..||.||.|||||.|||||.|||||||||||.||.|||
BL01996___yjl   1001 TGGCGACGTTCAGCCCTGTCAACTCAGGTACGCTTGCAAGCCTGGGCCGC   1050

BSNT_02085___   1051 AAAGACGCGGTTGCCATCATTGGTGCTAATTCTACACCGCTTAAAGGTCT   1100
                     ||||||||.||||||.|.||.||.||.||....|||.|.||||||||.||
BL01996___yjl   1051 AAAGACGCAGTTGCCGTTATCGGCGCGAACAGCACATCTCTTAAAGGCCT   1100

BSNT_02085___   1101 TCCTGCTTCCTTGATGAAAGAAGCAAGTAACGTACGCTATTTAACACACA   1150
                     .||||||||.||||||||||||||.||.|||||.|||||..|.|..||||
BL01996___yjl   1101 GCCTGCTTCATTGATGAAAGAAGCGAGCAACGTCCGCTACCTGAGCCACA   1150

BSNT_02085___   1151 TTAAAGGACTTTTCAGCCTGGCTTACTAA   1179
                     |.|||||.||.||||||||||||||.|||
BL01996___yjl   1151 TAAAAGGTCTGTTCAGCCTGGCTTATTAA   1179


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