Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03038 and BL01997

See Amino acid alignment / Visit BSNT_03038 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence dna-align/BSNT_03038___dacC.1.5803.seq
#    -bsequence dna-align/BL01997___dacC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03038___dacC-BL01997___dacC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03038___dacC-BL01997___dacC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03038___dacC
# 2: BL01997___dacC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1642
# Identity:     973/1642 (59.3%)
# Similarity:   973/1642 (59.3%)
# Gaps:         308/1642 (18.8%)
# Score: 2699.0
# 
#
#=======================================

BSNT_03038___      1 ATGATGAAGCGCAGAGAGGCGGGGAAATTAATGAAAAAAAGCATA--AAG     48
                                                   |||||.|||  ||||  |||
BL01997___dac      1 ------------------------------ATGAAGAAA--CATATGAAG     18

BSNT_03038___     49 CTT--------TATGTTGCTGTTTTACTGCTTTTCGTCATTG-CTTCGGT     89
                     |||        ||||.||.||.|      ||||  || |||| |||.|| 
BL01997___dac     19 CTTTGTCTGTGTATGATGATGAT------CTTT--GT-ATTGACTTTGG-     58

BSNT_03038___     90 GCCTTATATGCATCAGGCTGC-------GCTT-GCCGCTGAAAAACAAGA    131
                                  |.|||.||       |||| |.||||||..||.|||.
BL01997___dac     59 -------------CCGGCAGCATGGACGGCTTGGGCGCTGAGGAAAAAGG     95

BSNT_03038___    132 TGCACTTTCCGGGCAGATCGATAAGATTTTAGCTGATC-ATCCTGCCCTC    180
                     .|..||....|.|||.||||||.||.|.||| ..||.| |.||||...|.
BL01997___dac     96 CGGGCTCAAAGAGCAAATCGATCAGCTGTTA-AAGACCGAACCTGATTTA    144

BSNT_03038___    181 GAAGGCGCAATGGCCGGCATCACCGTTCGCTCTGCGGAAACAGGTGCTG-    229
                     .||||.||..|.||.|||||||.|||..|.||||||||||     ||.| 
BL01997___dac    145 AAAGGAGCGCTCGCAGGCATCAGCGTCAGGTCTGCGGAAA-----GCGGG    189

BSNT_03038___    230 ----TTCTATATGAACATTCAGGAGACACCCGAATGAGGCCTGCCTCTTC    275
                         |..||||.|.||||...||.||.||.||.|||||.|||||.||...
BL01997___dac    190 AAAATGATATACGGACATATGGGCGATACACGGATGAGACCTGCGTCCAA    239

BSNT_03038___    276 TCTAAAGCTTTTGACAGCGGCCGCGGCACT-TTCTGTCCTTGGCGAGAAC    324
                     |||.||||||||.||.||.||.||.|| || |||.|||||.||||||.||
BL01997___dac    240 TCTGAAGCTTTTAACGGCAGCAGCTGC-CTATTCCGTCCTGGGCGAGGAC    288

BSNT_03038___    325 TATTCTTTTACAACCGAGGTCCGGACGGAT---------------GGAAC    359
                     |||.|.|||.|.||.|||||...|.|.|||               ||.||
BL01997___dac    289 TATACCTTTCCCACAGAGGTAATGGCTGATGGGGCGCGAGCCGCGGGCAC    338

BSNT_03038___    360 ACTGAAAGGGAAAAAGCTGAATGGTAACCTTTATTTGAAAGGGAAAGGCG    409
                     |||.|||               ||.|.|||||||.|.|||||.|||||||
BL01997___dac    339 ACTCAAA---------------GGCAGCCTTTATATAAAAGGAAAAGGCG    373

BSNT_03038___    410 ATCCGACACTTTTACCATCTGATTTTGACAAAATGGCTGAGAAATTGAAA    459
                     |||||||.|||||..||.|.||.|||.|..|||||||          .||
BL01997___dac    374 ATCCGACGCTTTTGACAGCGGACTTTCAGCAAATGGC----------CAA    413

BSNT_03038___    460 A--ATTCCGGCGTAAAAGTAATTAAAGGCA--------ATC---------    490
                     |  |.||||    ||||      .||||.|        |||         
BL01997___dac    414 AGCACTCCG----AAAA------CAAGGGATCACAGTTATCCGGGGAGAC    453

BSNT_03038___    491 -TGATCGGTGATGATACGTGGCATGATGACAT--GCGATTATC---ACCT    534
                      ||.||||.||||||.|.|||.|.|||||.||  ||.|||.||   ||||
BL01997___dac    454 TTGGTCGGCGATGATTCCTGGTACGATGAAATCCGCTATTCTCAAGACCT    503

BSNT_03038___    535 GATATGCCTTGGAGCGATGAATACACATATTATGGCGCGCCAATCTCCGC    584
                         |.|| ||||.|||||||.||.||||.|||||.||||..||.||.||
BL01997___dac    504 ----TTCC-TGGACCGATGAAGACGCATACTATGGAGCGCAGATTTCAGC    548

BSNT_03038___    585 TCTAACAGCGTCTCCGAATGAAGACTATGATGCAGGCACTGTGATTGTTG    634
                     |.||||.|..||.||.|||||||||||||||||.||.||.||.||..|.|
BL01997___dac    549 TTTAACTGTTTCGCCAAATGAAGACTATGATGCCGGAACGGTCATAATCG    598

BSNT_03038___    635 AGGTCACCCC--------AAATC--AAAAAGAAGGGGAAGAGCCTGCCGT    674
                     |.||.|.|||        |||.|  |||||          |.|||||.||
BL01997___dac    599 ACGTGAACCCTGCCGGAAAAACCGGAAAAA----------AACCTGCTGT    638

BSNT_03038___    675 GTCTG-TCTCTCCGAAAACCGATTATATAACGATAAAGAACGATGCTGAA    723
                     .| || ||.|.|||.||||..|..||.|.|..||.||.||||||||..|.
BL01997___dac    639 AT-TGCTCACCCCGCAAACAAACCATGTCAAAATCAAAAACGATGCCAAG    687

BSNT_03038___    724 ACGACTGCTGCCGGTTCAGAGAAAGACCTCACAATCGAAAGAGAGCATGG    773
                     ||...||||||||....|.|.|||||..||||.||..||||..|.||.||
BL01997___dac    688 ACTGTTGCTGCCGACGGAAAAAAAGATATCACGATTAAAAGGAAACACGG    737

BSNT_03038___    774 AACAAACACGATTACAATTGAAGGGAGCG-TACCGGTTGACTCAAACAAG    822
                     |..|||.||.||...|||..|||||| || |.||           |||||
BL01997___dac    738 AGGAAATACCATCCAAATCAAAGGGA-CGATTCC-----------ACAAG    775

BSNT_03038___    823 -----ACAAAGG------AATGGATTTCTGTCTGGGAGCCTGCCGGATAT    861
                          .|||.||      |||||.||.|.||.||||||||..|.|.||||
BL01997___dac    776 GCGCTTCAAGGGTCAGACAATGGGTTGCGGTTTGGGAGCCGTCAGAATAT    825

BSNT_03038___    862 GCCTTAGATTTATTTAAGCAGTCACTAAAAAAACAAGGTAT-----TACT    906
                     ||..|.|||||||||||.|||.|..||.|..|||||||.||     |.||
BL01997___dac    826 GCACTCGATTTATTTAAACAGGCTTTACATCAACAAGGCATTCGAATCCT    875

BSNT_03038___    907 GTGAAAG---------GGGACATC----AAGACGGGTGAAGCACCTAGTT    943
                     |.|||||         ||.|.|.|    ||.||.|    .|||||    .
BL01997___dac    876 GGGAAAGACTAAAATCGGCAAAGCGCCAAAAACAG----CGCACC----G    917

BSNT_03038___    944 CTTCAGATGTGCTGCTCTCTCATCGCTCAATGCCTTTATCGAAACTTTTT    993
                     |.|||          .|.|.||||..||.|||||..|.||..|.||..|.
BL01997___dac    918 CATCA----------CCACACATCAATCCATGCCGCTGTCAGAGCTGATG    957

BSNT_03038___    994 GTGCCGTTCATGAAATTAAGTAATAACGGACATGCCGAAGTGCTCGTAAA   1043
                     .|.||.||.|||||..|.||.||.|||||.||||.||||..|||..|.||
BL01997___dac    958 ATTCCCTTTATGAAGCTCAGCAACAACGGCCATGGCGAAACGCTGATCAA   1007

BSNT_03038___   1044 AGAGATGGGGAAAGTG--AAAAAAGGAGAAGGGAGCTGGGAAAAGGGGCT   1091
                     .||.|||||  |||.|  ...|.|.|.|||||.||||||||..|.|||||
BL01997___dac   1008 GGAAATGGG--AAGGGCCGCGAGACGTGAAGGAAGCTGGGATCAAGGGCT   1055

BSNT_03038___   1092 CGAAGTGTTAAACAGTAC---ACTTCCAAAATTTGGTGTTGATTCTAAAT   1138
                     .||.||||||||   |||   |||.|..|.||||||..|.||..|..||.
BL01997___dac   1056 AGAGGTGTTAAA---TACGGAACTGCAGAGATTTGGACTGGACACGGAAA   1102

BSNT_03038___   1139 CACTCGTCTTAAGGGACGGATCAGGAATCTCACATA-----TTGA-TGCT   1182
                     .|.||||..|.||.|||||.|||||.|||||.||||     |||| |.||
BL01997___dac   1103 AAATCGTTCTCAGAGACGGCTCAGGCATCTCGCATATCAATTTGATTTCT   1152

BSNT_03038___   1183 GTATCCTCAGATCAACTTTCACAGCTGTTATATGACATTCAGGATCAGAG   1232
                     |.| |.||||||||     ||.||||.||.|||..|.||||.||..|||.
BL01997___dac   1153 GCA-CATCAGATCA-----CAAAGCTATTGTATTCCGTTCAAGACGAGAA   1196

BSNT_03038___   1233 TTGGTTCTCGGCTTATCTAAATTCATTACCTGTTGC--GGGCAACCCTGA   1280
                     .|||||..||.|.|.|.....||||.|.||.|||||  |.|.||.|  ||
BL01997___dac   1197 ATGGTTTCCGTCGTTTGCCCGTTCACTCCCAGTTGCAGGTGAAAGC--GA   1244

BSNT_03038___   1281 CAGAATGGTGGGCGGAACGCTGAGAAACCGCATGAAAGACACTCCTGCAC   1330
                     |||||||||.|||||.||..|.||||||||..||||||||.|..||..|.
BL01997___dac   1245 CAGAATGGTCGGCGGCACATTAAGAAACCGGCTGAAAGACCCGGCTCTAA   1294

BSNT_03038___   1331 AAGGAAAAGTAAGAGCAAAAACCGGATCGC--TCAGTACGGTAAGCTCTC   1378
                     ||||||||||.||.||.|||||.||.||.|  |||  ||.||.||.||..
BL01997___dac   1295 AAGGAAAAGTCAGGGCGAAAACTGGCTCTCTTTCA--ACCGTCAGTTCCT   1342

BSNT_03038___   1379 TATCGGGGTACGCAGAAACAAAGAGCGGAAAAAAACTTG-TTTTCTCTAT   1427
                     |.|||||.||.|..||.||....||||||||.|.| ||| |||||||.||
BL01997___dac   1343 TGTCGGGCTATGTCGATACTGCAAGCGGAAAGACA-TTGATTTTCTCCAT   1391

BSNT_03038___   1428 TCTTCTAAAT-GGATTGATTGATGAAGAGGATGGAAAAGATATTGAGGAT   1476
                     |||.||.||| .|.|.| |.|||||.|||.|.|||||.||||||||.||.
BL01997___dac   1392 TCTCCTCAATCAGCTCG-TGGATGATGAGAAAGGAAAGGATATTGAAGAC   1440

BSNT_03038___   1477 CAAATCGCTGTCATTTTGGCAAATCAATAA------------   1506
                     .||||||.|          |||||  ||.|            
BL01997___dac   1441 AAAATCGTT----------CAAAT--ATTAGCTTCTTCATGA   1470


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