Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00912 and BL02008

See Amino acid alignment / Visit BSNT_00912 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence dna-align/BSNT_00912___ydeO.1.5803.seq
#    -bsequence dna-align/BL02008___ydeO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00912___ydeO-BL02008___ydeO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00912___ydeO-BL02008___ydeO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00912___ydeO
# 2: BL02008___ydeO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     750/873 (85.9%)
# Similarity:   750/873 (85.9%)
# Gaps:           0/873 ( 0.0%)
# Score: 3258.0
# 
#
#=======================================

BSNT_00912___      1 ATGAATACAACCAAAAAACATAAGAAATTTAAAGCGAAAATGATTTTCCA     50
                     |||||||.||.|.|||||||||.||||||||.||||||.|||||||||.|
BL02008___yde      1 ATGAATAAAATCGAAAAACATAGGAAATTTAGAGCGAAGATGATTTTCAA     50

BSNT_00912___     51 AATCATCATGGTTATCATTGGAGGAATCATAGCGGCGTATGGACTAGAAA    100
                     |.||||.|||||.||.||.|||||||||||||||||.||||||.|.||||
BL02008___yde     51 AGTCATAATGGTCATGATCGGAGGAATCATAGCGGCATATGGATTGGAAA    100

BSNT_00912___    101 CAGTGCTCATTCCAAACAGTGTATCTGATGGAGGGGTGACGGGTCTGAGC    150
                     |||||||.|||||||||||||||||||||||.||.|||||.||.||.|||
BL02008___yde    101 CAGTGCTGATTCCAAACAGTGTATCTGATGGCGGAGTGACAGGACTTAGC    150

BSNT_00912___    151 ATCGTTGGTTCACAGCTATTCAACTTGCCGCTGGGGATTTTGATTGCTGT    200
                     ||.|||||||||||.||.||..|.||||||||.||||||.|.||.||.||
BL02008___yde    151 ATTGTTGGTTCACAACTGTTTGATTTGCCGCTTGGGATTCTTATCGCGGT    200

BSNT_00912___    201 GATCAACATTCCATTTGTCTGGTTAGGATATAAGCAAATTGGGAAAAGCT    250
                     ..|.|||||.||.|||||||||.|.||||||||||||||.||||||||||
BL02008___yde    201 TTTAAACATACCGTTTGTCTGGCTGGGATATAAGCAAATCGGGAAAAGCT    250

BSNT_00912___    251 TTGCATTATTATCAATTATCGGAATCGTATCGCTTGCCGCGGGGACAAGC    300
                     ||||..||||.||.|||||||||||||.|||.|||||.||.||||||||.
BL02008___yde    251 TTGCGCTATTGTCCATTATCGGAATCGCATCACTTGCAGCAGGGACAAGT    300

BSNT_00912___    301 TTTTTTCACCACACACCCGCTATCATAGAAGGAGATACCCTGTTAATTAC    350
                     |||.|.||||||||.||.|||||.||.|||||.||||||.||.||.|.||
BL02008___yde    301 TTTATGCACCACACTCCAGCTATAATCGAAGGGGATACCTTGCTAGTCAC    350

BSNT_00912___    351 CGTTGTCGGCGGGATTATCCTTGGATTCGGAATGGGGCTGGCGCTGCGTA    400
                     .||||||||.|||||.|||||||||||.|||||||||||||||||.||.|
BL02008___yde    351 TGTTGTCGGGGGGATCATCCTTGGATTTGGAATGGGGCTGGCGCTCCGCA    400

BSNT_00912___    401 ATGGCGGCGCATTAGATGGAATTGACATGCTTGCTGTGCTGCTATCCCGA    450
                     |||||||.|||||.||.||||||||.|||||||||||..||.||||.|||
BL02008___yde    401 ATGGCGGAGCATTGGACGGAATTGATATGCTTGCTGTTTTGTTATCGCGA    450

BSNT_00912___    451 AAACTGCCATTCGGAACGAGCGATCTCATTCTATTCTTAAACCTATTTGT    500
                     |||.|||||||.||||||||||||||.|||||||||||.|||||.|||||
BL02008___yde    451 AAATTGCCATTTGGAACGAGCGATCTTATTCTATTCTTTAACCTTTTTGT    500

BSNT_00912___    501 GTTTATTTTTGTTTCCACAGTATTTGGCTTACAAGGGGCATTGCTTTCAG    550
                     ||||||||||||||||.|.|||||||||||.||.|||||||||||.||||
BL02008___yde    501 GTTTATTTTTGTTTCCGCTGTATTTGGCTTGCAGGGGGCATTGCTGTCAG    550

BSNT_00912___    551 TCATTGCTTACTACATTGCATCCAAAGTGATTCATGTTGTGGAGGAAGGC    600
                     |||||||.||||||||.||.||||||||.|||||||||||.||||||||.
BL02008___yde    551 TCATTGCCTACTACATCGCGTCCAAAGTCATTCATGTTGTCGAGGAAGGG    600

BSNT_00912___    601 TTAAGCGGCTCTAAAACCTTTCAAATTATTACAACCCAACCTGAATTAAT    650
                     ||||||||.||||||||.||||||||.|||||||.|.|||||||||||||
BL02008___yde    601 TTAAGCGGATCTAAAACTTTTCAAATCATTACAAGCGAACCTGAATTAAT    650

BSNT_00912___    651 GGTAGAGACAATACGTGATCAATTAGGCCGAAGCGCCACATATAAAGAAG    700
                     |||.||||||||.|||||||||||.||||||||.||.|||||||||||||
BL02008___yde    651 GGTTGAGACAATTCGTGATCAATTGGGCCGAAGTGCTACATATAAAGAAG    700

BSNT_00912___    701 CTTACGGGGGTTTTTCCCACGAGAAATTTAAAGAAATCACATGTGTCATC    750
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BL02008___yde    701 CTTACGGGGGTTTTTCCCACGAGAAATTTAAAGAAATCACCTGTGTCATC    750

BSNT_00912___    751 AATCGTTTAGAAGAAACCAAACTAAAGGAAATTATTAATGATATTGATAA    800
                     ||.||.||||||||.||||||.||||.|||||.||||||||..|||||||
BL02008___yde    751 AACCGCTTAGAAGACACCAAATTAAAAGAAATCATTAATGAAGTTGATAA    800

BSNT_00912___    801 ATCCGCCTTTGTCACCGTATATGACGTAGCTGAAGTGAAGGGCAGCAATT    850
                     |...||.|||||.||.||||||||||||||||||||.||||||||.||||
BL02008___yde    801 AAATGCTTTTGTTACTGTATATGACGTAGCTGAAGTTAAGGGCAGTAATT    850

BSNT_00912___    851 TTAGAAGTCTTAATCATCATTAA    873
                     ||||||..|.||||..||||||.
BL02008___yde    851 TTAGAAAACCTAATATTCATTAG    873


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