Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00970 and BL02016
See
Amino acid alignment /
Visit
BSNT_00970 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence dna-align/BSNT_00970___ydgF.1.5803.seq
# -bsequence dna-align/BL02016___aapA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00970___ydgF-BL02016___aapA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00970___ydgF-BL02016___aapA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00970___ydgF
# 2: BL02016___aapA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1391
# Identity: 1084/1391 (77.9%)
# Similarity: 1084/1391 (77.9%)
# Gaps: 22/1391 ( 1.6%)
# Score: 4136.0
#
#
#=======================================
BSNT_00970___ 1 GTGACAGACGACATGAC-GAAAGACAATATAAATCAGCAAACGTTGCAGA 49
||||||||.||..|.|| ||.| ||.|||||.|..|.||||..||...||
BL02016___aap 1 GTGACAGAAGATGTAACTGACA-ACGATATACACGAACAAAAATTATCGA 49
BSNT_00970___ 50 GAGGCTTGAAAAACAGGCATATCCAGCTCATCGCCATCGGCGGAGCCATT 99
|||||.||||||||||||||||.||||||||||||||||||||.||.||.
BL02016___aap 50 GAGGCCTGAAAAACAGGCATATTCAGCTCATCGCCATCGGCGGGGCGATC 99
BSNT_00970___ 100 GGGACAGGCTTATTTCTCGGCTCTGGCAAATCGATTCATTTTGCCGGACC 149
||.||.||..|.|||||.||.||.||.|||||.||.||||||||.|||||
BL02016___aap 100 GGAACGGGGCTGTTTCTTGGTTCGGGGAAATCAATCCATTTTGCAGGACC 149
BSNT_00970___ 150 TTCGATTTTATTTGCTTATATGATCACAGGGATTATTTGCTTCTTAATTA 199
.||||||||||||||||||.||||.||.||.||.|||||.||.||.||||
BL02016___aap 150 GTCGATTTTATTTGCTTATCTGATTACGGGAATCATTTGTTTTTTCATTA 199
BSNT_00970___ 200 TGAGATCGCTGGGTGAACTGCTGTTATCAAACTTGAACTATCACTCTTTT 249
||.|.||.||.||.||||||||.|||||.||.|||.|.||.||.||.|||
BL02016___aap 200 TGCGTTCTCTTGGAGAACTGCTCTTATCCAATTTGGAATACCATTCGTTT 249
BSNT_00970___ 250 GTGGACTTTGTACAAGACTACCTAGGCGATATGGCAGCATTTATCACCGG 299
||.|||||||||..|||||||.|||||||.|||||.||||||||.||.||
BL02016___aap 250 GTCGACTTTGTAAGAGACTACTTAGGCGACATGGCGGCATTTATAACGGG 299
BSNT_00970___ 300 CTGGACATATTGGTTCTGCTGGATTTCCATTGCGATGGCTGATCTGACAG 349
.||||||||.|||||.|||||||||||..|.||.|||||.|||.|.||.|
BL02016___aap 300 GTGGACATACTGGTTTTGCTGGATTTCGCTCGCAATGGCCGATTTAACCG 349
BSNT_00970___ 350 CAGTCGGGCTCTACACTCAATATTGGCTCCCGGGTGTGCCGCAATGGGTG 399
|.||||||||.||.||.|||||.|||||.||.|.|||.|||||||||.||
BL02016___aap 350 CGGTCGGGCTTTATACCCAATACTGGCTGCCTGATGTACCGCAATGGCTG 399
BSNT_00970___ 400 CCCGGCTTAATCGCTCTAATTATTTTACTGATTATGAACCTGGCGACAGT 449
|||||.||.|||||.||.||.|||||.|||||.|||||||||||.||.||
BL02016___aap 400 CCCGGATTGATCGCCCTGATCATTTTGCTGATCATGAACCTGGCCACCGT 449
BSNT_00970___ 450 CAAGCTATTTGGAGAATTAGAATTTTGGTTTGCTTTGATTAAAGTCATTG 499
||||||.|||||||||||.||.||.|||||.||.||.||.||||||||||
BL02016___aap 450 CAAGCTTTTTGGAGAATTGGAGTTCTGGTTCGCGTTAATCAAAGTCATTG 499
BSNT_00970___ 500 CCATTTTGGCGTTAATCGTCATTGGCCTTGTGATGATTTTCAAAGGCTTT 549
|.||.||||||.|.||||..||.||.|||.|.|||||.||||||||.|||
BL02016___aap 500 CGATATTGGCGCTGATCGCGATCGGACTTTTCATGATCTTCAAAGGATTT 549
BSNT_00970___ 550 TCCACAAGCTCAGG-AGTGTCCAGC--TTCACAAATCTCTGGAGCCACGG 596
||.||....||.|| |.|| |.|| ||||| ||.||.|||||||||||
BL02016___aap 550 TCTACCCATTCGGGCACTG--CCGCCTTTCAC-AACCTTTGGAGCCACGG 596
BSNT_00970___ 597 AGGCCTGTTCCCGAATGGCATGCACGGGTTTATCCTCTCGTTCCAGATGG 646
.|||.||||.||.|||||..|||||||.|||.||||.||.||||||||||
BL02016___aap 597 CGGCATGTTTCCTAATGGACTGCACGGATTTCTCCTTTCATTCCAGATGG 646
BSNT_00970___ 647 TTGTGTTTGCTTTTGTCGGCATTGAGCTTGTCGGGCTTACAGCCGGTGAA 696
||||.|||||.|||||.|||||.||.|||||.|||||.|||||.||.|||
BL02016___aap 647 TTGTCTTTGCGTTTGTAGGCATCGAACTTGTGGGGCTGACAGCGGGGGAA 696
BSNT_00970___ 697 ACAGAAA-ACCCTGAAAAAGTAATCCCTAAGGCGATCAACAATATTCCTG 745
|| |||| |.||.|||||.||.||.|||||.||||||||||||||.||.|
BL02016___aap 697 AC-GAAAGATCCCGAAAAGGTCATTCCTAAAGCGATCAACAATATCCCCG 745
BSNT_00970___ 746 TCCGTGTGCTGCTTTTTTATATCGGGGCTCTTCTCGTGATTATGAGCATC 795
|.||.||..||||||||||||||||.||.||.||.||.||.|||||||||
BL02016___aap 746 TTCGGGTTTTGCTTTTTTATATCGGTGCGCTCCTTGTAATCATGAGCATC 795
BSNT_00970___ 796 TATCCTTGGGATGTCATCAATCCCAGCGAAAGCCCATTCGTACAAGTATT 845
|||||.|||.|||||||||||||.|..||.||.||.|||||.|||||.||
BL02016___aap 796 TATCCGTGGAATGTCATCAATCCTAATGAGAGTCCGTTCGTCCAAGTCTT 845
BSNT_00970___ 846 TGTCGCTGTTGGCATCGTCGGGGCTGCAAGTATTATCAACTTTGTTGTAT 895
.|..||.||.||||||.|.|.|||||||||.||.|||||||||||.||..
BL02016___aap 846 CGCAGCGGTCGGCATCATTGCGGCTGCAAGCATCATCAACTTTGTGGTGC 895
BSNT_00970___ 896 TGACTTCCGCTGCTTCAGCATGCAACAGCGCTGTATTCAGTACAAGCCGT 945
||||.||.||.|||||.|||.||||||||||.||.|||||.||||||||.
BL02016___aap 896 TGACATCGGCGGCTTCGGCAAGCAACAGCGCAGTCTTCAGCACAAGCCGG 945
BSNT_00970___ 946 ATGGTCTATTCCCTGGCGAAAGATCACAATGCGCCTGAGTCAATGGCGAA 995
|||.|.||.||.||.||||||||.||.||||||||.|...|.|||.|.||
BL02016___aap 946 ATGATATACTCGCTCGCGAAAGAACATAATGCGCCCGGCGCTATGACCAA 995
BSNT_00970___ 996 ACTGA-CTCAGCGTAAAGTGCCTAGAAATGCTTTATTCTTTTCAGCTATC 1044
||||| ||| .||.||||||||..|.|||||.||.||.||.|||||..||
BL02016___aap 996 ACTGACCTC-CCGCAAAGTGCCGGGCAATGCATTGTTTTTCTCAGCGGTC 1044
BSNT_00970___ 1045 GTGATTTTAATCGGTGTTACGTTAAACTACATCATGCCAGAAGGC--GTA 1092
||.|||.|.||.||..|.|.|.|.|||||.||||||||.|| || ||.
BL02016___aap 1045 GTTATTCTGATTGGCATCATGCTGAACTATATCATGCCTGA--GCAAGTG 1092
BSNT_00970___ 1093 TTCACCCTGATCACAAGTATTTCAACCGTATGCTTTATCTACATTTGGGG 1142
||.||.||.||.|||||.||.||.||..|||||||.||||..||||||||
BL02016___aap 1093 TTTACGCTCATTACAAGCATCTCGACGATATGCTTCATCTTTATTTGGGG 1142
BSNT_00970___ 1143 GATTACGGTCATCTGCCATATGAAATACCGCAAAACAAGACCTGAATTAG 1192
.||.||.||||||||||||.||||||||||||.|||.|||||.||.||||
BL02016___aap 1143 AATAACCGTCATCTGCCATTTGAAATACCGCAGAACTAGACCGGATTTAG 1192
BSNT_00970___ 1193 CGAAAACAAACAAGTTTAAGCTTCCGCTTTATCCGTTTACAAATTACCTG 1242
||||||.||||||.||.|||.|.||||||||.||||||.|||||||..||
BL02016___aap 1193 CGAAAAGAAACAAATTCAAGATGCCGCTTTACCCGTTTTCAAATTATGTG 1242
BSNT_00970___ 1243 ATTCTTGCGTTCCTGGCGTTTGTTCTGGTTGTGCTGGCACTGGCACAGGA 1292
.||||.|..||.||.||||||.|.||..|||||||.||||||||.|||||
BL02016___aap 1243 GTTCTCGGTTTTCTTGCGTTTATCCTCATTGTGCTCGCACTGGCGCAGGA 1292
BSNT_00970___ 1293 TACTCGTGTTTCCTTATTTGTCACACCGGTTTGGTTTATTTTGCTGATTG 1342
.||.||||||||||||||||||||.||||||||||||||..|||||||.|
BL02016___aap 1293 CACCCGTGTTTCCTTATTTGTCACGCCGGTTTGGTTTATCATGCTGATCG 1342
BSNT_00970___ 1343 TGATTTATAAAGTGAGAAAAGCGAAG---CATCAA---TAA 1377
.||||||.||..||||||||.|.||| |..||| ||.
BL02016___aap 1343 CGATTTACAAGCTGAGAAAACCTAAGTCACGGCAAGTGTAG 1383
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.