Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03970 and BL02027
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03970___yrrN.1.5803.seq
# -bsequence dna-align/BL02027___yrrN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03970___yrrN-BL02027___yrrN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03970___yrrN-BL02027___yrrN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03970___yrrN
# 2: BL02027___yrrN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity: 714/951 (75.1%)
# Similarity: 714/951 (75.1%)
# Gaps: 42/951 ( 4.4%)
# Score: 2617.0
#
#
#=======================================
BSNT_03970___ 1 ATGAAAAAACCAGAGCT-CTTAGTGACGCCGACGAGCACAG---CGGACA 46
||||||||.||.||.|| ||| ||.|||||||| ..|.| ||||.|
BL02027___yrr 1 ATGAAAAAGCCTGAACTGCTT-GTCACGCCGAC---TTCTGTTTCGGATA 46
BSNT_03970___ 47 TTTTGCC----GCTCATACAGGCGGGGGCAACTGCGTTTTTAGTTGGGGA 92
||..||| || |.|||||||.||...|||||||.|..|.||.||
BL02027___yrr 47 TTAAGCCTTTGGC----AGAGGCGGGCGCCGATGCGTTTATCATCGGTGA 92
BSNT_03970___ 93 ACAGAGATACGGCTTGAGATTAGCCGGAGAATTTTCTCGTGAAGATGTAA 142
|||.||.|||||..||.|.||||||||.||.|||||..|.|||||.||||
BL02027___yrr 93 ACAAAGGTACGGTCTGCGTTTAGCCGGGGAGTTTTCCAGAGAAGAAGTAA 142
BSNT_03970___ 143 CAAAAGCCGTAGAGATT---GCTCACAAAGAAGGAGCAAAAGTATACGTT 189
.|.|||||.| .||| |||||..||.||||.|||||||||||.|||
BL02027___yrr 143 AAGAAGCCAT---CATTCAGGCTCATGAAAAAGGCGCAAAAGTATATGTT 189
BSNT_03970___ 190 GCTGTAAATGCAATTTTCCATAACGATAAAGTGGGT----GAGCTTGGCG 235
|||||.||.||.|||||.||.||.| |..|||| ||.|| |
BL02027___yrr 190 GCTGTGAACGCGATTTTTCACAATG----ACCGGGTTCCGGAACT----G 231
BSNT_03970___ 236 AA----TATCTGGCTTTCTTAGCAGAAGCCGGTGTCGATGCAGCGGTATT 281
|| ||.||..|.|||||.|..||.||.||.|..|||||.|..||.||
BL02027___yrr 232 AATGACTACCTTTCATTCTTGGACGAGGCAGGCGCGGATGCGGTTGTCTT 281
BSNT_03970___ 282 CGGCGATCCTGCCGTGCTGATGGCTGCCCGTGAATCTGCGCCTGCTC-TG 330
|||||||||.|||||.|||||||||||.||.|||||.||||| |..| ||
BL02027___yrr 282 CGGCGATCCCGCCGTACTGATGGCTGCACGGGAATCAGCGCC-GAACATG 330
BSNT_03970___ 331 AAGCTTCATTGGAGCACAGAAACGACAGGCACCAACTATTATACATGCAA 380
||||||||.||||..||.||||||||.|..|||||..|||||.|.|||||
BL02027___yrr 331 AAGCTTCACTGGAATACGGAAACGACCGCAACCAATCATTATTCCTGCAA 380
BSNT_03970___ 381 CTACTGGGGACGCAAGGGTGCGGCGCGCTCTGTGCTTGCCAGAGAATTAA 430
|||.|||||.||||||||.|||..||||.|.||||||||.|||||..|.|
BL02027___yrr 381 CTATTGGGGGCGCAAGGGCGCGAAGCGCGCGGTGCTTGCAAGAGAGCTCA 430
BSNT_03970___ 431 ACATGGACAGCATTGTTGAGATTAAAGAAAATGCGGAAGTCGAAATTGAA 480
||||||||||.||.||||||||||||||.||.||.||||||||.||||||
BL02027___yrr 431 ACATGGACAGTATCGTTGAGATTAAAGAGAAAGCAGAAGTCGAGATTGAA 480
BSNT_03970___ 481 ATCCAGGTGCATGGAATGACATGCATGTTCCAATCGAAGCGTTCTTTGAT 530
||.|||||.||.||.|||||||||||||||||.||.|||||.||..||||
BL02027___yrr 481 ATTCAGGTTCACGGCATGACATGCATGTTCCAGTCAAAGCGCTCCCTGAT 530
BSNT_03970___ 531 TGGAAACTATTTTGAATATCAGGGCAAAGTCATGGACATTGAAAGAAAGA 580
.||.||||||||||||||.|||||.|||||||||||.||.|||.|.||||
BL02027___yrr 531 CGGCAACTATTTTGAATACCAGGGAAAAGTCATGGATATCGAAGGCAAGA 580
BSNT_03970___ 581 AAAAAGAATCAGGCATGTTTTTACACGATAAAGAACGTGATAATAAATAT 630
||||||||..||||||||.|.|.||.|||||||||||.|..|||||||||
BL02027___yrr 581 AAAAAGAAAAAGGCATGTATCTCCATGATAAAGAACGCGGAAATAAATAT 630
BSNT_03970___ 631 CCGATTTTCGAAGATGAAAACGGCACTCACATCATGAGCCCGAACGATGT 680
||||||||||||||.|||||||||||.|||||||||||.|||||.||.||
BL02027___yrr 631 CCGATTTTCGAAGACGAAAACGGCACGCACATCATGAGTCCGAATGACGT 680
BSNT_03970___ 681 GTGCATCATTGATGAGCTCGAGGAATTGATAGATGCCGGAATTGATTCTT 730
.|||||||||||||||||.||.||.||.||.||||||||.||.|||||.|
BL02027___yrr 681 CTGCATCATTGATGAGCTTGAAGATTTAATCGATGCCGGCATCGATTCAT 730
BSNT_03970___ 731 TCAAAATCGATGGTGTTTTGAAAACGCCTGAATACCTAATAGAAGTCACC 780
|.||||||||.||..||||.|||.||...||||||.|.|..|||||.||.
BL02027___yrr 731 TTAAAATCGACGGAATTTTAAAATCGGTCGAATACATGACTGAAGTAACG 780
BSNT_03970___ 781 AAAATGTACAGAGAAGCAATTGATTTGTGCGTGGAAAACCGTGACGAATA 830
...||||||.|.|||||.||.||..|.|||.|.|.|.||.|.||.|.|||
BL02027___yrr 781 GCCATGTACCGCGAAGCCATCGACCTTTGCATCGCAGACAGGGAAGCATA 830
BSNT_03970___ 831 CGAAGCGAAAAAAGAAGACTGGATCGAACGCATTGAA-AGCATCCAGCCA 879
.||||..||.||||||.|.||||||||.||.||.||| ||| |.|||||.
BL02027___yrr 831 TGAAGACAAGAAAGAACAATGGATCGAGCGGATCGAACAGC-TGCAGCCT 879
BSNT_03970___ 880 GTAAACAGAAAAATTGATACCGGATTCTTCTTCAAGGAAACGGTTTATTA 929
|.||||.|.|..|||||||||||||||||.|||||.|||||.||.||.||
BL02027___yrr 880 GCAAACCGCAGCATTGATACCGGATTCTTTTTCAAAGAAACAGTATACTA 929
BSNT_03970___ 930 A 930
|
BL02027___yrr 930 A 930
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