Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03974 and BL02030

See Amino acid alignment / Visit BSNT_03974 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence dna-align/BSNT_03974___yrzB.1.5803.seq
#    -bsequence dna-align/BL02030___yrzB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03974___yrzB-BL02030___yrzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03974___yrzB-BL02030___yrzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03974___yrzB
# 2: BL02030___yrzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     224/286 (78.3%)
# Similarity:   224/286 (78.3%)
# Gaps:           5/286 ( 1.7%)
# Score: 872.0
# 
#
#=======================================

BSNT_03974___      1 ATGGAACACGGCGAAAAAAATATTACAATTGTTGACGATCAAGGAAATGA     50
                     |||||||||||.||||||||.|||||||||||.||||||.||||.|||||
BL02030___yrz      1 ATGGAACACGGAGAAAAAAACATTACAATTGTAGACGATAAAGGGAATGA     50

BSNT_03974___     51 ACAGCTTTGTGAAGTGCTGTTTACATTTGAAAACGAAGAGTTTGGCAAGT    100
                     ||||||.|||||||||||.|||||||||||.|.|||..|||||..|||||
BL02030___yrz     51 ACAGCTGTGTGAAGTGCTCTTTACATTTGACAGCGATCAGTTTAACAAGT    100

BSNT_03974___    101 CTTATGT-CTTGTACTATCCAATCGAATCAAAAGATGACGAGGAAGTAGA    149
                     |.||.|| ||| ||.|||||.||.|||.||.|.||.||.||.||..|.||
BL02030___yrz    101 CATACGTGCTT-TATTATCCGATTGAAGCACAGGACGATGAAGAGATCGA    149

BSNT_03974___    150 AATTCTTGCTTCCAGCTTCACGCCAAACGAAGACGGTGAAAACGGTGAGC    199
                     .||.|.||||||.||||||...||.||.||||..||.|||.||||.||.|
BL02030___yrz    150 GATCCATGCTTCAAGCTTCGTACCGAATGAAGCAGGAGAAGACGGCGAAC    199

BSNT_03974___    200 TATTCCCGATTGAAACTGACGAAGAATGGGATATGATCGAAGAAACACTA    249
                     |..|.|||||||||||.||.|||||.|||||||||||.||.||.||.||.
BL02030___yrz    200 TGATGCCGATTGAAACAGAAGAAGAGTGGGATATGATTGAGGAGACGCTG    249

BSNT_03974___    250 AACACATTCTTAGCGGACGAAGACGAAGAATAA---    282
                     |||||.||.||||||||.||||||||||||.||   
BL02030___yrz    250 AACACGTTTTTAGCGGATGAAGACGAAGAAGAATAA    285


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