Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00616 and BL02044
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence dna-align/BSNT_00616___hxlR.1.5803.seq
# -bsequence dna-align/BL02044___hxlR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00616___hxlR-BL02044___hxlR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00616___hxlR-BL02044___hxlR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00616___hxlR
# 2: BL02044___hxlR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 261/374 (69.8%)
# Similarity: 261/374 (69.8%)
# Gaps: 37/374 ( 9.9%)
# Score: 881.0
#
#
#=======================================
BSNT_00616___ 1 TTGAGCCGGATGGACGACAAAAGGTTTAATTGTGAGAAGGAATTAACGCT 50
.||...||.|||||..|.||||..|||||||||||.|||||.||.|||||
BL02044___hxl 1 ATGTCACGAATGGAGAATAAAACATTTAATTGTGAAAAGGAGTTGACGCT 50
BSNT_00616___ 51 TGCA--GTGATTGGCGGTAAATGGAAAATGCTCATTTTATGGCATTTAGG 98
|| .|.||.||.||.||.|||||||||||.|||||.|||..||||||
BL02044___hxl 51 --CAACATTATCGGAGGAAAGTGGAAAATGCTGATTTTGTGGTTTTTAGG 98
BSNT_00616___ 99 AAAAGAAGGCACAAAACGGTTCAATGAATTAAAAACATTGATTCCTGATA 148
|||||||||.||.|||.|.|||...|||||||||.|..||||.||.|..|
BL02044___hxl 99 AAAAGAAGGTACGAAAAGATTCGGAGAATTAAAAGCCCTGATGCCCGGCA 148
BSNT_00616___ 149 TTACGCAGAAG-ATCCTCGTGAATCAGCTGAGAGAGCTTGAGCAGGAT-A 196
||||||| ||| ||.||.||||||||||||.|.||..|.||..|.||| |
BL02044___hxl 149 TTACGCA-AAGAATGCTGGTGAATCAGCTGCGTGAATTGGAAGAAGATCA 197
BSNT_00616___ 197 TGATTGTTCACAGGGAAGTGTATCCAGTTGTCCCGCCGAAGGTTGAATAT 246
| |||||.||.||||||||.|||||.|||||.||.||.||.|||||||||
BL02044___hxl 198 T-ATTGTACATAGGGAAGTATATCCGGTTGTTCCCCCAAAAGTTGAATAT 246
BSNT_00616___ 247 TCTCTGACCCCGCACGGAGAAAGCCTCATGCCTATTCTTGAAGCCATGTA 296
||.||.||....||.||||||||..|.||||||||..|.||.||.|||||
BL02044___hxl 247 TCCCTTACAAAACAGGGAGAAAGTTTAATGCCTATATTAGAGGCGATGTA 296
BSNT_00616___ 297 TGAGTGGGGGAAAGGTTATATGGAA------TTGATTGATATCGACAAAA 340
|||||||||.|||..||||||.||| || || |||||
BL02044___hxl 297 TGAGTGGGGTAAAAATTATATAGAAACCAACTT--TT--------CAAAA 336
BSNT_00616___ 341 -ATGTCATGAAAGAATCGTTGTAA 363
|||.|| |||.|
BL02044___hxl 337 GATGACA------AATAG------ 348
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