Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03814 and BL02083
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03814___yqeL.1.5803.seq
# -bsequence dna-align/BL02083.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03814___yqeL-BL02083.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03814___yqeL-BL02083.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03814___yqeL
# 2: BL02083
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity: 280/358 (78.2%)
# Similarity: 280/358 (78.2%)
# Gaps: 2/358 ( 0.6%)
# Score: 1076.0
#
#
#=======================================
BSNT_03814___ 1 ATGAACCAAAAGTCCATTTTAAAGATCGCAGCTGCGGCTTGCGACGATAA 50
|||.|.|||...||.||||||||.||.||.||.|.|||.|||||.|||||
BL02083 1 ATGGATCAAGCTTCAATTTTAAAAATTGCCGCAGAGGCCTGCGATGATAA 50
BSNT_03814___ 51 ACGGGCAGAGGATATTTTAGCACTGGATATGGAAGGTATTTCTCTGGTTG 100
||||||.||.||||||.|.||..||.|||||.|.||.|||||.||.||.|
BL02083 51 ACGGGCGGAAGATATTATCGCCTTGAATATGCAGGGGATTTCCCTCGTGG 100
BSNT_03814___ 101 CTGATTATTTTCTGATCTGTCACGGAAATTCAGATAAACAGGTACAGGCG 150
||||.|||||||||||.||.||.||.||.||.||.||||||||.|||||.
BL02083 101 CTGACTATTTTCTGATTTGCCATGGGAACTCTGACAAACAGGTTCAGGCC 150
BSNT_03814___ 151 ATTGCCCGTGAAATCAAGGATCAGGCTGATGAAAACGGCATTCAAGTCAA 200
||||||||.|||||.||||||||.|||||.|||||.||.|||.|.||.||
BL02083 151 ATTGCCCGGGAAATTAAGGATCAAGCTGAAGAAAATGGAATTGATGTGAA 200
BSNT_03814___ 201 AAAGATGGAAGGCTTTGATGAAGCAAGATGGGTTCTCGTTGATCTAGGCG 250
.||.|||||.||||||||.|||||.|||||||||.|..|.|||.|.||||
BL02083 201 GAAAATGGAGGGCTTTGACGAAGCCAGATGGGTTTTAATCGATTTGGGCG 250
BSNT_03814___ 251 ATGTGATTGTCCATGTCTTCCACAAGGACGAAAGAAGCTACTACAACCTT 300
|.||..|||||||.||.||||||||.||.|||.||.||||.|||||||||
BL02083 251 ACGTCGTTGTCCACGTTTTCCACAAAGAGGAACGAGGCTATTACAACCTT 300
BSNT_03814___ 301 GAAAAGCTGTGGGGAGACGCTCCGCTCGCAGATCTTGACCTT-GGAATGA 349
||||||||||||||||||||.|||.|.|.|||.||| .|.|| |||.|.|
BL02083 301 GAAAAGCTGTGGGGAGACGCGCCGATTGAAGACCTT-TCGTTCGGAGTTA 349
BSNT_03814___ 350 ATCAATGA 357
||.|||||
BL02083 350 ATGAATGA 357
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