Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03799 and BL02091
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_03799___yqxA.1.5803.seq
# -bsequence dna-align/BL02091___yqxA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03799___yqxA-BL02091___yqxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03799___yqxA-BL02091___yqxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03799___yqxA
# 2: BL02091___yqxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity: 232/371 (62.5%)
# Similarity: 232/371 (62.5%)
# Gaps: 79/371 (21.3%)
# Score: 719.5
#
#
#=======================================
BSNT_03799___ 1 -TTGATTGCATACTTT----GGAAAATACTTACT-GCTTGTCACGATCAT 44
|.|.|| |||| |||||||.|.||.| ||||| |.|..||||
BL02091___yqx 1 GTGGCTT-----CTTTTATGGGAAAATGCATATTGGCTTG-CGCTGTCAT 44
BSNT_03799___ 45 GTTTTTAGGCGTTCTGTTCGGCATGCAGCAGGCAAACAACGGGATG-CTG 93
||||||.||||||||..||||||||||||||||.||||||||.||| .||
BL02091___yqx 45 GTTTTTCGGCGTTCTTCTCGGCATGCAGCAGGCGAACAACGGAATGATTG 94
BSNT_03799___ 94 AGTATGAAAGGCTATCATGACCCTTCACTGAGGGGGGCGTTTA------- 136
| .||||||||.||..|.|||| |||| ||||
BL02091___yqx 95 A-AATGAAAGGGTACGAGGACC-----CTGA--------TTTAAAAGCAG 130
BSNT_03799___ 137 CGCTCACCGACGGAAAAGATA----------ATGAAAAAGAAGCCTCAAT 176
||||||.| ||| |||..|||||.||.|||.|
BL02091___yqx 131 CGCTCAGC----------ATATCTGAAGGGGATGCGAAAGAGGCGTCAGT 170
BSNT_03799___ 177 CCTAGGAGAAACAGTCACGGCAAAAGATTTAGAAGAAAAACAAAAAGAGC 226
|||.|| |..||| ||..|||||.||.||||||||||||||||
BL02091___yqx 171 CCTCGG-----CCATCA----AATCGATTTGGAGGAAAAACAAAAAGAGC 211
BSNT_03799___ 227 TGGAAAAGGTGGAGACATTCAATATGTTTTCAAAAGCCGGACAAGCGCT- 275
|||||.||.||||..|.|||||..|.|||||....|||||.|.|||.||
BL02091___yqx 212 TGGAACAGCTGGAAGCTTTCAACCTCTTTTCCTCGGCCGGCCGAGCCCTG 261
BSNT_03799___ 276 -----TTCGAACACCGTAACCAATACTGCCCAGTCAATGTATGAATGGAT 320
|||| ||.||.||.||.||||..|||.|||||||.|||||
BL02091___yqx 262 GCCGATTCG------GTCACAAACACAGCCCGTTCATTGTATGACTGGAT 305
BSNT_03799___ 321 ACGGGATATGAATC--AATAA 339
|..|||.| ||.| ||||.
BL02091___yqx 306 AAAGGAAA--AAACGGAATAG 324
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