Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03796 and BL02093
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_03796___hemN.1.5803.seq
# -bsequence dna-align/BL02093___hemN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03796___hemN-BL02093___hemN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03796___hemN-BL02093___hemN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03796___hemN
# 2: BL02093___hemN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1186
# Identity: 818/1186 (69.0%)
# Similarity: 818/1186 (69.0%)
# Gaps: 92/1186 ( 7.8%)
# Score: 2693.0
#
#
#=======================================
BSNT_03796___ 1 TTGAAATCAGCTTATATCCATATCCCATTTTGTGAGCATATTTGCCACTA 50
.|||||.||||.|||||.|||||.||.|||||.|||||.||||||||.||
BL02093___hem 1 ATGAAAGCAGCATATATACATATTCCGTTTTGCGAGCACATTTGCCATTA 50
BSNT_03796___ 51 CTGCGATTTCAATAAATATTTTATTCAAAGTCAGCCAGTCGACGAGTATT 100
.|||||.|||||.||.|.||||||||||..||||||.||.||.||.||||
BL02093___hem 51 TTGCGACTTCAACAAGTTTTTTATTCAATCTCAGCCCGTTGATGAATATT 100
BSNT_03796___ 101 TAAACGCACTC----GAACAGGAAATGATAAATACAATAGCAAAAACCGG 146
| ||..|| ||..||||||||...|||.||||.|....||||||
BL02093___hem 101 T----GCGTTCCTTAGAGAAGGAAATGGCCAATTCAATGGAGGCAACCGG 146
BSNT_03796___ 147 GCAGCCTGATCTTAAAACAATCTTTATCGGAGGAGGCACGCCAACCTCCC 196
.||.||.||.||.|||||.|||||||||||.|||||.|||||.||.||.|
BL02093___hem 147 ACATCCGGAGCTGAAAACGATCTTTATCGGGGGAGGAACGCCGACATCGC 196
BSNT_03796___ 197 TGTCTGAGGAACAGCTTAAAAAGCTAATGGA---CATGATCAACCGCGTG 243
||||.|..|..|||||..||..|||..|.|| ||| || |.|||||.
BL02093___hem 197 TGTCGGCAGCTCAGCTCGAACGGCTCCTCGATTCCAT--TC-ATCGCGTT 243
BSNT_03796___ 244 CTAAAGCCCTC---AAGCGACTTATCGGAATTTGCGGTTGAAGCGAATCC 290
.|.||.||.|| |||| ||| .|.||||||||.||.|||||.|||||
BL02093___hem 244 TTGAAACCGTCCGAAAGC--CTT-GCTGAATTTGCAGTGGAAGCCAATCC 290
BSNT_03796___ 291 GGACGACTTGTCCGCAGAGAAATTAAAAATATTAAAAGAAGCAGGCGTAA 340
.|||||.||.||.||.||.||..|..|..|.|||||||..||.||.|||.
BL02093___hem 291 CGACGATTTATCAGCTGAAAAGCTGGATGTTTTAAAAGCTGCCGGTGTAG 340
BSNT_03796___ 341 ATCGCCTCAGCTTTGGTGTGCAAACGTTCGAAGACGATCTGTTAGAAAAA 390
|..|.||.||||||||.|||||.|||||.||||||||.|||.|..|||||
BL02093___hem 341 ACAGGCTGAGCTTTGGCGTGCAGACGTTTGAAGACGAGCTGCTGAAAAAA 390
BSNT_03796___ 391 ATCGGCCGAGTGCACAAGCAAAAAGATGTATTCACCTCTTTTGAAAGAGC 440
||||||.|.||.|||.||||||||||.|||.||...||.|||||||||||
BL02093___hem 391 ATCGGCAGGGTTCACGAGCAAAAAGACGTACTCGTTTCGTTTGAAAGAGC 440
BSNT_03796___ 441 -------GCGGGATATCGGTTTTGAGAATATCAGTCTTGATCTCATGTTC 483
||| ||.|||||.||||||||.||||||||.||||||
BL02093___hem 441 GAGAAAGGCG-------GGGTTTGATAATATCAGCCTTGATCTGATGTTC 483
BSNT_03796___ 484 GGGCTTCCGGGGCAAACCCTCAAGCATCTGG----AACATTCCATAAACA 529
||.||.||.||.||||||.||...||.||.| |.|..||.|| |
BL02093___hem 484 GGTCTGCCCGGACAAACCATCGGCCACCTCGCTTCATCGCTCGAT----A 529
BSNT_03796___ 530 CTGCTTTATCACTGGATGCCGAGCATTATTCCGTTTACTCCCTTATTGTA 579
|.||..|..|.||.|.|||.||.||.|||||.|||||.||.||.||.||.
BL02093___hem 530 CGGCGCTTGCCCTCGGTGCTGAACACTATTCGGTTTATTCGCTGATCGTC 579
BSNT_03796___ 580 GAACCGAAAACGGTATTTTATAATTTGATGCAAAAAGGGCGGCTTCATCT 629
|||||||||||.||.||.||.||.||||||.|||||||.||||||||.||
BL02093___hem 580 GAACCGAAAACCGTTTTCTACAACTTGATGAAAAAAGGCCGGCTTCACCT 629
BSNT_03796___ 630 TCCGCCGCAGGAGCAGGAAGCTGAAATGTATGAAATGGTGATGAGCCAGA 679
.|||||||||||.|||||||||||||||||.|||.|.||.|||.|..|.|
BL02093___hem 630 GCCGCCGCAGGATCAGGAAGCTGAAATGTACGAACTCGTTATGCGGAAAA 679
BSNT_03796___ 680 TGGAAGCTCACGGCATTCATCAATATGAAATCAGCAACTTTGCTAAGGCA 729
||||||.....|||||....|||||.|||||||||||||..||.||...|
BL02093___hem 680 TGGAAGAAGCGGGCATCGGCCAATACGAAATCAGCAACTACGCCAAAAAA 729
BSNT_03796___ 730 GG-CATGGAATCTAAGCACAATCTAACGTATTGGAGCAACGAACAATATT 778
|| .|||..|.| ||.||.||.||.||.|||||||.|||.||..|.||||
BL02093___hem 730 GGATATGAGAGC-AAACATAACCTCACATATTGGAACAATGAGGATTATT 778
BSNT_03796___ 779 TCGGTTTCGGAGCCGGCGCTCACGGATATATCGGCGGCACACGAACAGTG 828
|||||||.||.||.|||||.|||||.||||||...||...|.||||.||.
BL02093___hem 779 TCGGTTTTGGCGCGGGCGCACACGGTTATATCAATGGTGAAAGAACGGTA 828
BSNT_03796___ 829 AACGTCGGACCTGTTAAGCATTACATTGACCTGATAGCTGAAAA---GGG 875
||.|..||.|||||.||.|||||.||.|||||||| ||||.| .||
BL02093___hem 829 AATGCGGGCCCTGTCAAACATTATATCGACCTGAT---TGAACAATCCGG 875
BSNT_03796___ 876 TTTTCCGTACA--GAGATACACATGAAGTAACAACAGAAGAACAGATTGA 923
.|||||.||.| ||.|..|||||| ||.||||.|.|.|||||||||||
BL02093___hem 876 CTTTCCTTATAAGGAAAAGCACATG--GTCACAAAAAATGAACAGATTGA 923
BSNT_03796___ 924 GGAAGAAATGTTTTTAGGTTTGAGAAAAACAGCCGGTGTCAGCAAAAAAC 973
.||||||||||||.|.|||.|..|||||||.|..||.||.|.||||.|.|
BL02093___hem 924 AGAAGAAATGTTTCTCGGTCTTCGAAAAACTGAGGGAGTAAACAAAGAGC 973
BSNT_03796___ 974 GATTCGCAGAAAAATACGGCCGTTCCCTGGATGGACT-TTTCCCAAGCGT 1022
|.||....||||.|||.||..|.||..|.||.|..|| |||||.||| ||
BL02093___hem 974 GCTTTTTCGAAACATATGGAAGATCTGTTGACGATCTCTTTCCGAAG-GT 1022
BSNT_03796___ 1023 GTTAAAAGACC--TCGCT----GAAAAAGGGCTGATT-----CAC----- 1056
|.| || ||||| ||||.||||.||||| |||
BL02093___hem 1023 GCT------CCATTCGCTGGAAGAAACAGGGTTGATTGTGAACACGAACA 1066
BSNT_03796___ 1057 --AATTCGGAGTCTGCCGTTTATTTGACTCATCAAGGGAAATTATTAGGC 1104
|| |||.|.|.|.||.|||.|.||.|||.|.||.||.
BL02093___hem 1067 AAAA------------CGTGTTTCTAACACATAATGGAAAACTGTTGGGA 1104
BSNT_03796___ 1105 AATGAAGTTTTTGGCGCTTTTTTGGGTGAGTTATAA 1140
||||||||.|||...||.||..||||||||||||||
BL02093___hem 1105 AATGAAGTATTTCAGGCATTCCTGGGTGAGTTATAA 1140
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