Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03128 and BL02104

See Amino acid alignment / Visit BSNT_03128 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence dna-align/BSNT_03128___yocG.1.5803.seq
#    -bsequence dna-align/BL02104___desR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03128___yocG-BL02104___desR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03128___yocG-BL02104___desR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03128___yocG
# 2: BL02104___desR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     527/600 (87.8%)
# Similarity:   527/600 (87.8%)
# Gaps:           0/600 ( 0.0%)
# Score: 2343.0
# 
#
#=======================================

BSNT_03128___      1 ATGATTAGTATATTTATTGCAGAAGATCAGCAAATGCTGCTGGGCGCTTT     50
                     ||||||||||||||||||||.|||||||||||.|||||..||||||||||
BL02104___des      1 ATGATTAGTATATTTATTGCGGAAGATCAGCAGATGCTCTTGGGCGCTTT     50

BSNT_03128___     51 AGGATCACTTCTAAACCTCGAAGACGATATGGAAGTCGTAGGCAAAGGTA    100
                     ||||||.|||||.|||.|.|||||.||||||||||||||.||||||||.|
BL02104___des     51 AGGATCGCTTCTGAACTTAGAAGATGATATGGAAGTCGTCGGCAAAGGCA    100

BSNT_03128___    101 CAACCGGCCAAGATGCTGTTGATTTTGTCAAAAAACGCCAGCCTGATGTA    150
                     |.|||||.||||||||.||||||||....|||||||..|.|||||||.||
BL02104___des    101 CTACCGGACAAGATGCCGTTGATTTCACAAAAAAACATCGGCCTGATATA    150

BSNT_03128___    151 TGTATTATGGACATTGAAATGCCCGGAAAAACAGGGCTTGAAGCTGCTGA    200
                     ||.||||||||||||||||||||||||||.||.|||||||||||||||||
BL02104___des    151 TGCATTATGGACATTGAAATGCCCGGAAAGACGGGGCTTGAAGCTGCTGA    200

BSNT_03128___    201 GGAGCTAAAAGATACAGGCTGCAAAATTATCATCTTAACCACCTTCGCCA    250
                     |||..||||.||||||||||||||.|||||.|||||||||||.||.|||.
BL02104___des    201 GGAATTAAAGGATACAGGCTGCAACATTATTATCTTAACCACTTTTGCCC    250

BSNT_03128___    251 GACCCGGTTACTTTCAGAGAGCTATTAAAGCTGGTGTTAAAGGCTATTTG    300
                     |.|||||.||.||||||.||||.||||||||.||||||||||||||||||
BL02104___des    251 GCCCCGGCTATTTTCAGCGAGCCATTAAAGCAGGTGTTAAAGGCTATTTG    300

BSNT_03128___    301 TTAAAAGACAGTCCGAGTGAAGAGCTGGCCAACGCCATCCGTAGCGTCAT    350
                     |||||.|||||.||.||.||||||||.||.|.|||||||||.||||||||
BL02104___des    301 TTAAAGGACAGCCCAAGCGAAGAGCTTGCGAGCGCCATCCGCAGCGTCAT    350

BSNT_03128___    351 GAACGGAAAACGAATCTATGCACCTGAGCTGATGGAGGACTTATACAGCG    400
                     |||.|||||.||.||||||||.|||||.||||||||.|||.|.|||||.|
BL02104___des    351 GAAAGGAAAGCGGATCTATGCGCCTGAACTGATGGAAGACATGTACAGTG    400

BSNT_03128___    401 AAGCTAACCCTCTTACAGATAGAGAAAAAGAAGTGCTTGAACTTGTGGCT    450
                     |.||.||.||.||.||||||||||||||||||||||||||||||||||||
BL02104___des    401 AGGCCAATCCCCTCACAGATAGAGAAAAAGAAGTGCTTGAACTTGTGGCT    450

BSNT_03128___    451 GACGGTAAAAACACAAAAGAAATCGCTCAGGAACTCAGCATCAAAAGCGG    500
                     |||||.||||||||||||||||||||.||.||||||||||||||||||||
BL02104___des    451 GACGGAAAAAACACAAAAGAAATCGCCCAAGAACTCAGCATCAAAAGCGG    500

BSNT_03128___    501 GACGGTGCGGAATTATATCTCAATGATTCTAGAAAAGCTTGAAGTGAAAA    550
                     .||.||.||.||||||||||||||||||||.|||||||||||.|||||||
BL02104___des    501 AACCGTACGAAATTATATCTCAATGATTCTTGAAAAGCTTGAGGTGAAAA    550

BSNT_03128___    551 ATCGAATTGAAGCCATTACCCGGTCAAAGGAAAAAGGCTGGTTTAAATAA    600
                     ||||.||||||||||||||.||.|||||||||||||||||||||||||||
BL02104___des    551 ATCGGATTGAAGCCATTACTCGTTCAAAGGAAAAAGGCTGGTTTAAATAA    600


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