Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04784 and BL02121
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence dna-align/BSNT_04784___yunA.1.5803.seq
# -bsequence dna-align/BL02121___lytH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04784___yunA-BL02121___lytH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04784___yunA-BL02121___lytH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04784___yunA
# 2: BL02121___lytH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1020
# Identity: 738/1020 (72.4%)
# Similarity: 738/1020 (72.4%)
# Gaps: 78/1020 ( 7.6%)
# Score: 2540.5
#
#
#=======================================
BSNT_04784___ 1 GTGAAAGTTTTGTTATCCGCTCTTCTTCTCCTTTTGTTTGCAT-TTG-AG 48
|||||||.|.|.|||||||.|||..|.|||||||||.| ||| ||| ||
BL02121___lyt 1 GTGAAAGCTGTATTATCCGTTCTCATCCTCCTTTTGCT--CATCTTGCAG 48
BSNT_04784___ 49 CCTTCTGTG---TCT------GGAAAAAAACTTTCAGATCCAGTGCTGTC 89
|| ||| ||| |||.||||| |||.||.|..||| |
BL02121___lyt 49 CC----GTGCGCTCTTGCAAAGGAGAAAAA-----AGAGCCCGATCTG-C 88
BSNT_04784___ 90 GAAACGGATGGAAT-----TATATCATAAAATCGAAGCTGTGACGCAGAT 134
.||| || |||| |.||||||||.|..|||||.|..||.||.||
BL02121___lyt 89 AAAA--GA--GAATGGCCCTTTATCATAAGACAGAAGCCGCAACCCATAT 134
BSNT_04784___ 135 CCCTTGGTATGCGCTCGCCGCTGTTGATCAATACGAAGAAAACGTGCGGA 184
.||||||||||...||||.||.||.||.|||||||||...||..|.||.|
BL02121___lyt 135 TCCTTGGTATGTTTTCGCGGCAGTCGACCAATACGAAATCAATATCCGCA 184
BSNT_04784___ 185 GCAACCGGAAAGATCTGCCTGAA--AAGGCGGGAATCATCAGCATCTATA 232
..|||||.|||||..|||| ||| ||...|||.| ||.|.|.||.||||
BL02121___lyt 185 AAAACCGCAAAGACTTGCC-GAAGCAAAAAGGGCA-CACCGGGATATATA 232
BSNT_04784___ 233 TACC------CGATGATATCTGGAGCGGGCCTGAAAACCCGAATCCGAAA 276
|.|| || |.||||||||.|||||||||||.|||||.|||
BL02121___lyt 233 TTCCGCAAAGCG------TGTGGAGCGGACCTGAAAACCCCAATCCTAAA 276
BSNT_04784___ 277 G--ACGATGCGCCGTTAAGCATTAAAGTGTTTGACGGAATCGGAATGGAT 324
| || || |||||.|.|||||.||.||.|||||||||||.||||||||.
BL02121___lyt 277 GATAC-AT-CGCCGCTCAGCATCAAGGTTTTTGACGGAATTGGAATGGAC 324
BSNT_04784___ 325 GGCGATGGAGACGG-------GAAAGCCGAGGTCAGCAACGATGAAGATA 367
||..|.|||||||| ||| ||| |.|||| ||||||||..
BL02121___lyt 325 GGAAACGGAGACGGACTCGCAGAA--CCG-GATCAG----GATGAAGACG 367
BSNT_04784___ 368 TCTTGTATACGTTCAGCCAATACTTACTGTCGTATGGCACAGA---TGAA 414
||.|.||||||||..|.||||||||..||.|.||.||.|..|| ||||
BL02121___lyt 368 TCCTTTATACGTTTGGACAATACTTGTTGACATACGGAAGGGACATTGAA 417
BSNT_04784___ 415 GACAACATCCGGATCGGGCTTTGGAATTATTACCGGCGTGATCAGACAGT 464
||.|||||.|||||.||.|||.|.|.||||....|.||||||||.||
BL02121___lyt 418 ---AATATCCGCATCGGTCTGTGGGAGTTTTACGAAAGGGATCAGACGGT 464
BSNT_04784___ 465 GGGGATTATATCTGAATTCATGAAGCTGTTTAAAGCCTACGGCCATATTG 514
.||.||.|||||.|..||.||.|.|||.|||.||...||||||||.||||
BL02121___lyt 465 CGGCATCATATCAGGCTTTATCAGGCTTTTTCAAAAATACGGCCACATTG 514
BSNT_04784___ 515 ATCTGGGCGAGCATGCATTCCCGCTTCCGATCAGAACCGATTACAGCTAC 564
||.|||||.||||.||.||.||.|||||..|.|||.|.|||||||||||.
BL02121___lyt 515 ATTTGGGCAAGCACGCCTTTCCCCTTCCCGTAAGATCAGATTACAGCTAT 564
BSNT_04784___ 565 CGAAGCACGTGGGGAGATGCCCGCGGCTTCGGTGGAAGGCGGATTCATGA 614
.|||||||.|||||||||||||||||.|||||.||.||.||.|||||.||
BL02121___lyt 565 AGAAGCACATGGGGAGATGCCCGCGGATTCGGGGGCAGACGCATTCACGA 614
BSNT_04784___ 615 AGGTACGGATATCTTTGCCCATTACGGCCTTCCTGTCAAATCCACATGTT 664
|||.||||||.|.||.||||||||||||||.||.|||...||.|||||.|
BL02121___lyt 615 AGGGACGGATTTGTTCGCCCATTACGGCCTCCCCGTCCGGTCGACATGCT 664
BSNT_04784___ 665 ACGGCGTAGTTGAAATGAAGGGCTGGAACCGCTTCGGAGGATGGAGAATC 714
|||||.|.||.||||||||.|||||||||||.|||||.||||||.|.|||
BL02121___lyt 665 ACGGCATTGTGGAAATGAAAGGCTGGAACCGTTTCGGCGGATGGCGGATC 714
BSNT_04784___ 715 GGCATCAGGGACATTAACAATACGTATCATTATTTTGCCCATCTCAATGG 764
||.|||||.|||||.|||||||||||.||||||||.||.|||.|.|| .|
BL02121___lyt 715 GGAATCAGAGACATCAACAATACGTACCATTATTTCGCTCATTTGAA-CG 763
BSNT_04784___ 765 GTTTGCCAAAGGGATT-AAAACAGGACAAATCGTTGAGCCTGGCCAAGTG 813
||||..||||.||.|| |||...|||.|||||||.|||||.|||||.|||
BL02121___lyt 764 GTTTCACAAAAGGCTTGAAAGTGGGAGAAATCGTCGAGCCCGGCCAGGTG 813
BSNT_04784___ 814 ATCGGATCAGTCGGCAGC-TCCGGATACGGCCCGCCGGGAACCGCCGGGA 862
|||||.|||||.|| ||| .|.||||||||.|||||||||||..|.||.|
BL02121___lyt 814 ATCGGCTCAGTTGG-AGCGACGGGATACGGGCCGCCGGGAACATCGGGAA 862
BSNT_04784___ 863 AGTTCCCGCCGCATCTGCACTATGGCATGTACAAAGATAACGGAAGAACC 912
|.||||||||.||.||.|||||.||||||||.|||||.||.||||||||.
BL02121___lyt 863 AATTCCCGCCCCACCTTCACTACGGCATGTATAAAGACAATGGAAGAACA 912
BSNT_04784___ 913 GAATGGTCATTTGATCCATACCCGCATTTGAGGGCGTGGGAGCGATATGA 962
||.|||||.|||||.||.||.||.|||||.|.|||.|||||.||..|.||
BL02121___lyt 913 GAGTGGTCTTTTGACCCTTATCCTCATTTAAAGGCATGGGAACGGAAGGA 962
BSNT_04784___ 963 A-TACCAAAAAAAGAAGTAA 981
| |.|.|||.||| ||.|||
BL02121___lyt 963 ACTTCGAAAGAAA-AAATAA 981
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