Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04771 and BL02135
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence dna-align/BSNT_04771___thrB.1.5803.seq
# -bsequence dna-align/BL02135___thrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04771___thrB-BL02135___thrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04771___thrB-BL02135___thrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04771___thrB
# 2: BL02135___thrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 975
# Identity: 672/975 (68.9%)
# Similarity: 672/975 (68.9%)
# Gaps: 99/975 (10.2%)
# Score: 2190.5
#
#
#=======================================
BSNT_04771___ 1 ATGAACGAAGCCGACATGCTGTTCTCTGTCACTGTTCCCGGAAGCACAGC 50
||||..||.||.|||||||||||.||.||.||.||||||||||||||.||
BL02135___thr 1 ATGACTGAGGCTGACATGCTGTTTTCCGTTACGGTTCCCGGAAGCACGGC 50
BSNT_04771___ 51 TAACCTAGGCCCCGGCTTTGATTCAGTCGGAATGGCGCTCAGCAGATATT 100
.||.||.|||||.|||||||||||||||||.||||||||...|.|.||||
BL02135___thr 51 CAATCTTGGCCCGGGCTTTGATTCAGTCGGCATGGCGCTGTCCCGCTATT 100
BSNT_04771___ 101 TGAAG-CTGACCGTCTTTGAAAGC-----GACAAATGGTCTTTTGAGGCT 144
| ||| |||.|.||.||| | ||..|.|||..||||||.|||
BL02135___thr 101 T-AAGACTGTCTGTTTTT-----CCTCATGATGAGTGGCGTTTTGAAGCT 144
BSNT_04771___ 145 GAAACAGAAACAGTCGCCGGAATTCCGGCGGGTACAGATAACCTGATCTA 194
|||||||||...||.||.|||||.||.|..||.||.||.||..|.||.||
BL02135___thr 145 GAAACAGAAGTCGTAGCGGGAATACCTGAAGGAACGGACAATTTAATTTA 194
BSNT_04771___ 195 TCAAGTGGCTAAACGGA---CCGCAGATTTGTACGGAAAAGAAATGCCTC 241
.||.|||||.||||||| |||||.|.|| ||||||||||.|.||.|
BL02135___thr 195 CCAGGTGGCCAAACGGACCGCCGCACACTT---CGGAAAAGAACTTCCGC 241
BSNT_04771___ 242 CTGTCCATGTGAAGGTGTGGAGCGACATCCCGCTTGCACGCGGCCTTGGC 291
|...||.|||.||.|||||||||||.||.||||||||.|||||.||.|||
BL02135___thr 242 CAAGCCTTGTCAAAGTGTGGAGCGATATTCCGCTTGCGCGCGGTCTCGGC 291
BSNT_04771___ 292 AGCAGCGCCGCGGCGATTGTAGCGGCCATTGAACTGGCTGATGAATTATG 341
||||||||.||.||.||||..||.||..||||.|||||..|.|||.| ||
BL02135___thr 292 AGCAGCGCAGCCGCAATTGCCGCTGCGGTTGAGCTGGCGAACGAACT-TG 340
BSNT_04771___ 342 -CGGCTTAAAGCTGTCTGAAGCG-GACAAGCTGCATTTAGCCAGTCTAGA 389
||..||.|||||.||.| |.|| ||.||.||.|||||.||.||.||.||
BL02135___thr 341 CCGATTTGAAGCTTTCAG-ACCGCGAGAAACTTCATTTTGCGAGCCTTGA 389
BSNT_04771___ 390 AGAAGGACACCCGGACAATGCTGGCGCTTCTCTCGTCGGCGGACTTGTGA 439
||||||.||.||.||||||||.||.||.||.||..|||||||.|||||.|
BL02135___thr 390 AGAAGGCCATCCTGACAATGCCGGAGCATCGCTTTTCGGCGGGCTTGTCA 439
BSNT_04771___ 440 TCGGCCTGCATGAGGATGACGAGACCCAAATGATCCGCGTCCCGAATGCT 489
||||.||.||||||||.||.||.||..|.|||.| |.||
BL02135___thr 440 TCGGACTTCATGAGGAAGATGAAACAGAGATGGT------------TTCT 477
BSNT_04771___ 490 ------GACA------TTGACGTAGTCGTTGTCATTCCTTTTTACGAAGT 527
|||| |.||.||.|||||.||||||||||||||.|||||
BL02135___thr 478 ATGAAAGACATCGATTTGGATGTCGTCGTCGTCATTCCTTTTTATGAAGT 527
BSNT_04771___ 528 GCTGACAAGAGACGCGAGAGACGTGCTT-CCGAAGGAGTTTC-CATATGC 575
||||||||.|||.|||.|.||.||.||| ||||| ||..|| |.||| |
BL02135___thr 528 GCTGACAAAAGATGCGCGGGATGTTCTTCCCGAA--AGCCTCTCTTAT-C 574
BSNT_04771___ 576 CG-ATGCCGTAAAAGCAAGTGCTGTCAGCAATATTCTCATTGCTGCGA-T 623
|| |.|||||..|||||||.||.|||||||||||.|||.|.||.| || |
BL02135___thr 575 CGAAAGCCGTGGAAGCAAGCGCGGTCAGCAATATGCTCGTCGCCG-GACT 623
BSNT_04771___ 624 CATGTCCAAGGATTGGCCGCTCGTCGGGAAAATCATGAAGAAGGATATGT 673
.|||.|.||.||||||..|||.|||||....||.|||.|.||.||..|.|
BL02135___thr 624 GATGGCGAAAGATTGGAAGCTTGTCGGCCGCATGATGCAAAAAGACCTCT 673
BSNT_04771___ 674 TCCATCAGCCGTACC---GGGCGATGCTTGTGCCTGAGCTGTCAAAAGTA 720
|.||.|||||.|||| |||| |||.||.||||||||.||.|||||.
BL02135___thr 674 TTCACCAGCCATACCGAAGGGC---GCTCGTCCCTGAGCTTTCGAAAGTG 720
BSNT_04771___ 721 GAGCACGTCGCCGAGATGAAG-----------GGCGCATATGGAACGGCT 759
|||| |||||| |||||.|..||.||||||
BL02135___thr 721 GAGC-----------ATGAAGCAGGCCAAAACGGCGCGTTCGGGACGGCT 759
BSNT_04771___ 760 CTCAGCGGAGCAGGCCCGACGATTCTCGTCATGACCGAAAAAGGAAAGGG 809
.|.||||||||.|||||||||||.||...|.|.|..|||||||||||.||
BL02135___thr 760 TTAAGCGGAGCCGGCCCGACGATCCTTTCCTTTATTGAAAAAGGAAAAGG 809
BSNT_04771___ 810 AGAAGAGCTAAAAGAACAGCTCGCGCTTC--ATTTCCCTCATTGTGAAGT 857
|||.|.|||.|.|.|.|||||.||| || |.||.||.||.|||||.||
BL02135___thr 810 AGAGGCGCTGAGAAACCAGCTTGCG--TCCAAGTTTCCGCACTGTGAGGT 857
BSNT_04771___ 858 AGAC-GCTTTGACCGTTCC-GAAAGAGGGAAGTATAATAGAGCGAAATCC 905
.||| ||.||.| .||.|| ||.|.| ||.|.|||..|.||..||||
BL02135___thr 858 CGACTGCCTTTA-TGTCCCGGATACA-GGCATTATCGTTGAAAGAAA--- 902
BSNT_04771___ 906 TTTATATCAAGTAAAAAGTGTATAG 930
||| ||||||.|||||.||.
BL02135___thr 903 -----ATC-AGTAAACAGTGTTTAA 921
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