Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04780 and BL02141
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence dna-align/BSNT_04780___yutE.1.5803.seq
# -bsequence dna-align/BL02141___yutE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04780___yutE-BL02141___yutE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04780___yutE-BL02141___yutE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04780___yutE
# 2: BL02141___yutE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 302/481 (62.8%)
# Similarity: 302/481 (62.8%)
# Gaps: 83/481 (17.3%)
# Score: 896.0
#
#
#=======================================
BSNT_04780___ 1 ---ATGTATTTTGTTGACAGAAGCAAAATCGAGAAAACACTAGGGTTCTT 47
|||||||||||.||..||..|||||||||.||.||.||....|||.|
BL02141___yut 1 ATGATGTATTTTGTCGATCGACACAAAATCGAAAACACGCTCAACTTCCT 50
BSNT_04780___ 48 CGAGCACCAGCTGGCGCTATTTGACTCACAAA------CAGACTGGCAGT 91
.||..|..|||||..|||.|.| |||| .|||.|||...|
BL02141___yut 51 GGAAGAGGAGCTGCGGCTTTAT------CAAATGCAGGAAGAATGGACTT 94
BSNT_04780___ 92 CTGAAATCGGGGAATTGGCACTTCAGCGTATAGGCCATCTGTTAATCGAA 141
|.||..|||...||...||.|||.|.||.||.|||||...|.|.||||||
BL02141___yut 95 CCGACGTCGAAAAAAAAGCGCTTGAACGAATCGGCCACACGCTGATCGAA 144
BSNT_04780___ 142 TGCATTTTGGATACAGGCAATGACATGATTGACGGCTTTATTATGCGGGA 191
||.||.|||||||.|||.||.||.|||||||||||||||||||||.|.||
BL02141___yut 145 TGTATATTGGATATAGGGAACGATATGATTGACGGCTTTATTATGAGAGA 194
BSNT_04780___ 192 CCCGGGAAGCTATGACGACATTATGGATATACTTGTTGATGAGAAAGTTG 241
.||||||||||||||||||||||||||||||||....|||||.||.||||
BL02141___yut 195 TCCGGGAAGCTATGACGACATTATGGATATACTGACCGATGAAAAGGTTG 244
BSNT_04780___ 242 TCA------CGGAAAAAGAGGGTGATGAGCTCA---AGAAA---TTGATC 279
||| ||||| ||.|| || .|||| ||||||
BL02141___yut 245 TCAGCCAAGCGGAA------GGCGA------CAGTTTGAAACATTTGATC 282
BSNT_04780___ 280 GCCTACCGCAAAACGTTGGTTCAACAGTATCTGCTCGCTGACAGCGGCGA 329
|||||.||.||.||.|||||.|||.|.||.||| |.||.|.|
BL02141___yut 283 GCCTATCGGAAGACATTGGTCCAAGACTACCTG---------AACGTCAA 323
BSNT_04780___ 330 GCTTTACAG----------GCTGATCAAGGC--GCAT---CAAACAGCTC 364
.|.|.| || ||||.||| || |||| .|||| ||||
BL02141___yut 324 CCATGA-AGAATTGGAAGAGCTGCTCA--GCAGGCATGCGGAAAC-GCTC 369
BSNT_04780___ 365 TTCAAGACTTCC--CGAAACGGATCAGAAGCTATTTGGAAAC--AGAGCT 410
...|| |.|||| || ||||||.|....||||| |||| .||.||
BL02141___yut 370 GAGAA-ATTTCCGGCG---CGGATCCGCGATTATTT--AAACCATGAACT 413
BSNT_04780___ 411 AGGACCTGTTTCCGCGTTTAAA------TAA 435
.||.||.||.|||||.||.||| |||
BL02141___yut 414 CGGTCCGGTATCCGCATTCAAACCGCACTAA 444
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