Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04788 and BL02147

See Amino acid alignment / Visit BSNT_04788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence dna-align/BSNT_04788___yunC.1.5803.seq
#    -bsequence dna-align/BL02147___yunC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04788___yunC-BL02147___yunC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04788___yunC-BL02147___yunC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04788___yunC
# 2: BL02147___yunC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     233/310 (75.2%)
# Similarity:   233/310 (75.2%)
# Gaps:           8/310 ( 2.6%)
# Score: 866.0
# 
#
#=======================================

BSNT_04788___      1 GTGGTAAACCTGACACCGATCATGATAGAAGGACAGCCTTTTACAGCTGT     50
                     .|||||||..|.||.||||||||||||||||..|||||.|||||.|||||
BL02147___yun      1 ATGGTAAATTTAACTCCGATCATGATAGAAGATCAGCCGTTTACGGCTGT     50

BSNT_04788___     51 GACAGTGAAACTTCCCAAAACGAATTTTATGGCCGTCGCCAATGATCACG    100
                     .||.||.|||||.||.||||||||.||||||||.||..|||||||.||.|
BL02147___yun     51 AACGGTCAAACTGCCGAAAACGAACTTTATGGCGGTAACCAATGACCATG    100

BSNT_04788___    101 GATACATTATGTGCGGCGCGCTTGATGTGGCGCTGCTGAATGAAAAATTA    150
                     ||||.|||||||||||.|||||||||||.||.|||||||||||.||||||
BL02147___yun    101 GATATATTATGTGCGGAGCGCTTGATGTCGCCCTGCTGAATGATAAATTA    150

BSNT_04788___    151 AAGGAGCGCGGCATTGTTGCTGGTCGC----GCAGTTGGTGTCCGCACCA    196
                     ||.||.||....||.||.||    |||    ||.||.||.||.||.||.|
BL02147___yun    151 AAAGAACGGAAAATCGTCGC----CGCCAGAGCCGTCGGCGTGCGGACGA    196

BSNT_04788___    197 TTGACCAGCTGTTAGACGCACCTTTAGAATCCGTCACGTACGCCGCGAAA    246
                     |.||.|||||..|.||.||.||..|.|||||.||.||..|.||.||...|
BL02147___yun    197 TCGATCAGCTTCTCGAAGCCCCGCTCGAATCTGTAACCGATGCGGCCGGA    246

BSNT_04788___    247 GATCTTGGCATCAAAGTCGGTATGAGCGGCAGAGAAGCGCTTTTAAAAAT    296
                     ||.||.|||||..|...|||.||||||||.|.||||||.|||||||||||
BL02147___yun    247 GAGCTCGGCATTCATCCCGGAATGAGCGGAAAAGAAGCCCTTTTAAAAAT    296

BSNT_04788___    297 GGTGAAATAA    306
                     ||||||||||
BL02147___yun    297 GGTGAAATAA    306


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