Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04792 and BL02150

See Amino acid alignment / Visit BSNT_04792 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:01
# Commandline: needle
#    -asequence dna-align/BSNT_04792___yunF.1.5803.seq
#    -bsequence dna-align/BL02150___yunF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04792___yunF-BL02150___yunF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04792___yunF-BL02150___yunF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04792___yunF
# 2: BL02150___yunF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 872
# Identity:     647/872 (74.2%)
# Similarity:   647/872 (74.2%)
# Gaps:          43/872 ( 4.9%)
# Score: 2324.0
# 
#
#=======================================

BSNT_04792___      1 GTGATTTATATCGGACTGACGGGGTGGGGGGATCATGACAGCATCTATCC     50
                     .||||||||||.|||.|.||.||.||||||||||||||||||.|.|||||
BL02150___yun      1 TTGATTTATATTGGATTAACAGGATGGGGGGATCATGACAGCCTGTATCC     50

BSNT_04792___     51 GCCGAAAACGGCCAGCCAGAAAAAATTG---CAGGCCTATTCCTCCCATT     97
                     |||.||.||...|||.||.||.||..||   ||   ||||||.||.||||
BL02150___yun     51 GCCCAAGACAAGCAGTCAAAACAAGCTGATCCA---CTATTCATCGCATT     97

BSNT_04792___     98 TTCCGATCGTGGAATTAGATGCGAGCTTTTACGCGATTCAGCCGGCGCGC    147
                     ||||||||||.||..|.||||||||||||||||||||.|||||.|.|||.
BL02150___yun     98 TTCCGATCGTCGAGCTTGATGCGAGCTTTTACGCGATACAGCCCGAGCGG    147

BSNT_04792___    148 AATAATGAAAAGTGGGTGAAGGAAACGCCCGAAACCTTCCAATTTATCGT    197
                     ||.||||||||||||||.|||||.|||||.||||||||.||.||||||||
BL02150___yun    148 AACAATGAAAAGTGGGTAAAGGAGACGCCGGAAACCTTTCAGTTTATCGT    197

BSNT_04792___    198 GAAAGCATATCAGGGCATGACAGGGCATCAGCGCGGCGAAATTCCCTTTG    247
                     .||.|||||||||||.||||||||||||||||||||.|||||.|||||||
BL02150___yun    198 TAAGGCATATCAGGGAATGACAGGGCATCAGCGCGGGGAAATCCCCTTTG    247

BSNT_04792___    248 ACTCAAAAGAGGAGATGTTTGATGCGTTTAAGGTGTCTTTAACGCCATAT    297
                     |..|.|||||.||.|||||||.|||.||||||.|.||.|||||||||   
BL02150___yun    248 AAACGAAAGACGACATGTTTGCTGCTTTTAAGCTCTCATTAACGCCA---    294

BSNT_04792___    298 TTACATAGCAA------TAAGCTCGCCATGGTGCTGTTTCAATTTCCGCC    341
                      ||||||  ||      ||||||.||.|||||.||.|||||.||||||||
BL02150___yun    295 -TACATA--AAAGCGGGTAAGCTGGCGATGGTCCTCTTTCAGTTTCCGCC    341

BSNT_04792___    342 TTGGTTTGACTGCAAGAAGGAGAATGTCGCCTATTTGAGAT-GGTGCAAG    390
                     .||||||||.||||||||.||.||.|||...||.||.|||| |||..|||
BL02150___yun    342 ATGGTTTGATTGCAAGAAAGAAAACGTCAATTACTTAAGATGGGTAAAAG    391

BSNT_04792___    391 CACCAAATGGGAGATATCCCTTGTGCGCTTGAATTCAGAAACCGTTCCTG    440
                      |..||||||||||||||||.|||||||||||||||||..|..|.||.||
BL02150___yun    392 -AGAAAATGGGAGATATCCCGTGTGCGCTTGAATTCAGGCATAGGTCATG    440

BSNT_04792___    441 GTTCTCGCCGCCA-TTTTATGAGCAGACGCTTTCATTTATGAA--AGC-G    486
                     |||...||| ||| |||||.||..|.|||||..|.||||||.|  ||| |
BL02150___yun    441 GTTTATGCC-CCAGTTTTACGACAAAACGCTCGCTTTTATGGAGGAGCAG    489

BSNT_04792___    487 GAAGGCTGGATTCACAGTGTCTGTGATGAACCGCAAATCGGAGAAGGCAG    536
                     .||   |||||||||||..|.||.||||||||.||....||.||||||||
BL02150___yun    490 CAA---TGGATTCACAGCATTTGCGATGAACCCCAGGCGGGCGAAGGCAG    536

BSNT_04792___    537 CGTTCCGACTGTGTTGCGCGCGACCGATGAAAAC---AAAACGCTCGTCA    583
                     |.|.||||||||..|.|.||||||   |||.|.|   ||||||||||||.
BL02150___yun    537 CATCCCGACTGTTCTTCACGCGAC---TGACAGCCGGAAAACGCTCGTCC    583

BSNT_04792___    584 GATTTCACGGACGCAACAAGCAGGGCTGGATGAAGCCTGATGGCGGGAAA    633
                     |.||||||||.|||||||||.|.||||||.|.|.|||...|..|||..||
BL02150___yun    584 GTTTTCACGGCCGCAACAAGGAAGGCTGGTTAAGGCCATCTTCCGGTCAA    633

BSNT_04792___    634 AACTGGCGGGAGGTCAGGTACTTATACCGCTACAACCAACAGGAGCTGGA    683
                     ||.|||||.||||||||.||.||.||....||.||..||||.||..|..|
BL02150___yun    634 AATTGGCGTGAGGTCAGATATTTGTATTTATATAATGAACAAGAATTAAA    683

BSNT_04792___    684 GGATTGGAAAAAGCACCTGAATGAATTGC---AGCAGCAATGTAAGGATG    730
                     .||.|||||||...||||   |||..|||   |.|||||.|..||..|.|
BL02150___yun    684 AGACTGGAAAAGAAACCT---TGAGCTGCTTGAACAGCAGTCGAAAAACG    730

BSNT_04792___    731 TTTTTGTCCTGTTCAACAATAATTCCGGCGGTGACGCTGCGGATAATGGC    780
                     |||..||.|||||.||.||.|||||.||||||||.||.||..|.||.||.
BL02150___yun    731 TTTACGTGCTGTTTAATAACAATTCGGGCGGTGATGCGGCTCAAAACGGT    780

BSNT_04792___    781 AAGCAGATGCTTGAACTGCTTGATATCGAGTACAGCGGACTTGCTCCGAG    830
                     |||||.|||.|.||.|||||..|.||.||.||||..||.|||.|.||.||
BL02150___yun    781 AAGCAAATGATGGAGCTGCTCAACATTGAATACAAAGGGCTTACGCCAAG    830

BSNT_04792___    831 ACAGCTCGATTTATT---TTAG    849
                     .||||||||||||||   .|||
BL02150___yun    831 GCAGCTCGATTTATTCAGCTAG    852


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04792 and BL02150

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
