Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04841 and BL02162

See Amino acid alignment / Visit BSNT_04841 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:02
# Commandline: needle
#    -asequence dna-align/BSNT_04841___yurU.1.5803.seq
#    -bsequence dna-align/BL02162___sufB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04841___yurU-BL02162___sufB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04841___yurU-BL02162___sufB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04841___yurU
# 2: BL02162___sufB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1399
# Identity:    1218/1399 (87.1%)
# Similarity:  1218/1399 (87.1%)
# Gaps:           2/1399 ( 0.1%)
# Score: 5354.0
# 
#
#=======================================

BSNT_04841___      1 ATGGCTAAAAAAATGCCTGATATTGGTGAATACAAGTATGGTTTTCACGA     50
                     ||||||||.||||||||.|||||.||.|||||.||.||.||||||..|||
BL02162___suf      1 ATGGCTAAGAAAATGCCGGATATCGGCGAATATAAATACGGTTTTGCCGA     50

BSNT_04841___     51 CAAGGACGTTTCCATTTTCCGTTCAGAGCGCGGATTGACAAAAGAAATCG    100
                     |||.||||||||||||||||||||||||||.|||||||||||||||||||
BL02162___suf     51 CAAAGACGTTTCCATTTTCCGTTCAGAGCGGGGATTGACAAAAGAAATCG    100

BSNT_04841___    101 TAGAAGAAATTTCTCGCATGAAAGAAGAGCCTCAATGGATGCTTGACTTC    150
                     |.|||||||||||.|||||||||||||||||.||.||||||||.|||||.
BL02162___suf    101 TTGAAGAAATTTCACGCATGAAAGAAGAGCCACAGTGGATGCTCGACTTT    150

BSNT_04841___    151 CGCTTGAAATCACTTGAGCATTTCTACAATATGCCGATGCCTCAATGGGG    200
                     |||||||||||.|||||.||.||||||||||||||.|||||.||||||||
BL02162___suf    151 CGCTTGAAATCTCTTGAACACTTCTACAATATGCCAATGCCGCAATGGGG    200

BSNT_04841___    201 CGGAGATTTAAACTCACTGAACTTTGACGAAATTACGTACTACGTAAAAC    250
                     ||||||||||||||||.|.||||||||.|||||.||.|||||.|||||.|
BL02162___suf    201 CGGAGATTTAAACTCATTAAACTTTGATGAAATCACATACTATGTAAAGC    250

BSNT_04841___    251 CGTCTGAGCGTTCAGAGCGTTCTTGGGATGAAGTTCCTGAAGAAATTAAG    300
                     |.||||||||||||||..|.||.|||||.|||||.|||||.|||||.||.
BL02162___suf    251 CTTCTGAGCGTTCAGAAAGATCATGGGACGAAGTGCCTGAGGAAATCAAA    300

BSNT_04841___    301 CAAACATTCGACAAGCTCGGTATTCCTGAAGCTGAACAAAAATACCTTGC    350
                     ||.|||||.|||||||||||.||.||.||||||||.||||||||..|.||
BL02162___suf    301 CAGACATTTGACAAGCTCGGAATCCCAGAAGCTGAGCAAAAATATTTGGC    350

BSNT_04841___    351 GGGTGTTTCTGCTCAGTACGAATCTGAGGTTGTATACCACAACATGAAAG    400
                     .|||||.||.||.||.||.||.||.||.||.||.|||||.||||||||||
BL02162___suf    351 CGGTGTATCCGCGCAATATGAGTCAGAAGTCGTTTACCATAACATGAAAG    400

BSNT_04841___    401 AAGATCTTGAAGCGCAAGGCATCGTCTTTAAAGACACTGACAGCGCGCTG    450
                     ||||.|||||..|.|||||.||||||||.||||||||.||||||||.||.
BL02162___suf    401 AAGACCTTGAGTCTCAAGGGATCGTCTTCAAAGACACAGACAGCGCCCTC    450

BSNT_04841___    451 AAAGAGAATGAAGATATTTTCCGTGAGCACTGGGCAAAAGTAATCCCGCC    500
                     |||||.||||||||.||||||||.|||||.|||||||||||.||||||||
BL02162___suf    451 AAAGAAAATGAAGACATTTTCCGCGAGCATTGGGCAAAAGTCATCCCGCC    500

BSNT_04841___    501 GACTGATAACAAGTTTGCGGCGCTT-AACTCAGCTGTTTGGTCCGGCGGA    549
                     ||||||.|||||||||||||| ||| ||||||||.||.|||||.||||||
BL02162___suf    501 GACTGACAACAAGTTTGCGGC-CTTGAACTCAGCGGTATGGTCAGGCGGA    549

BSNT_04841___    550 TCTTTCATCTACGTGCCTAAAGGCGTGAAGGTTGAAACACCGCTTCAAGC    599
                     ||.||||||||||||||.||||||||.||.||.||.||.|||||.|||||
BL02162___suf    550 TCATTCATCTACGTGCCAAAAGGCGTAAAAGTGGATACTCCGCTGCAAGC    599

BSNT_04841___    600 TTACTTCCGTATCAACTCTGAGAACATGGGTCAGTTCGAACGTACACTGA    649
                     .||||||||.||||||||.||.||||||||.|||||||||||.||.||||
BL02162___suf    600 ATACTTCCGCATCAACTCAGAAAACATGGGACAGTTCGAACGGACGCTGA    649

BSNT_04841___    650 TCATTGTTGACGAAGAAGCAAGCGTTCATTATGTTGAAGGCTGTACTGCG    699
                     ||||.||.|||||||..||...|||.||.|||||.||.||.|||||.||.
BL02162___suf    650 TCATCGTAGACGAAGGCGCTCACGTCCACTATGTAGAGGGATGTACAGCA    699

BSNT_04841___    700 CCTGTTTACACAACAAACTCACTTCACAGTGCGGTCGTTGAGATCATCGT    749
                     ||||||||.||.||.|||||.||||||||.|||||.||||||||||||||
BL02162___suf    700 CCTGTTTATACGACGAACTCCCTTCACAGCGCGGTTGTTGAGATCATCGT    749

BSNT_04841___    750 GAAAAAAGGCGGCTACTGCCGTTATACAACGATCCAAAACTGGGCGAACA    799
                     .||||||||||||||||||||||||||||||||.||||||||||||||||
BL02162___suf    750 TAAAAAAGGCGGCTACTGCCGTTATACAACGATTCAAAACTGGGCGAACA    799

BSNT_04841___    800 ACGTTTACAACCTTGTAACAAAGCGTACAGTCTGTGAAGAAAACGCAACA    849
                     ||||.|.|||||||||.|||||||||.|.||.||||||||||||||.||.
BL02162___suf    800 ACGTCTTCAACCTTGTGACAAAGCGTGCGGTTTGTGAAGAAAACGCGACG    849

BSNT_04841___    850 ATGGAATGGATCGACGGCAACATCGGTTCTAAGCTGACAATGAAATATCC    899
                     |||||||||||||||||.||||||||.||.||||||||||||||||||||
BL02162___suf    850 ATGGAATGGATCGACGGAAACATCGGCTCCAAGCTGACAATGAAATATCC    899

BSNT_04841___    900 GGCTTGTATCCTAAAAGGCGAAGGCGCGCGCGGTATGACGCTTTCTATCG    949
                     .||...||||||.||||||||||||||||||||.||||||||||||||||
BL02162___suf    900 TGCCGTTATCCTGAAAGGCGAAGGCGCGCGCGGCATGACGCTTTCTATCG    949

BSNT_04841___    950 CTCTTGCGGGTAAAGGCCAGCATCAGGATGCAGGTGCGAAAATGATTCAC    999
                     |.||.||.||.|||||.||||||||||||||.||||||||||||||||||
BL02162___suf    950 CCCTGGCAGGAAAAGGACAGCATCAGGATGCCGGTGCGAAAATGATTCAC    999

BSNT_04841___   1000 CTTGCACCAAACACATCATCTACAATCGTATCAAAATCGATTTCAAAACA   1049
                     ||||||||.||.||.|||||.||||||||.||||||||.||.||||||||
BL02162___suf   1000 CTTGCACCGAATACGTCATCCACAATCGTTTCAAAATCAATCTCAAAACA   1049

BSNT_04841___   1050 GGGCGGAAAAGTAACGTACCGCGGAATCGTCCACTTCGGACGCAAAGCGG   1099
                     .|||||||||||.||.||||||||||||||.|||||||||||||||||.|
BL02162___suf   1050 AGGCGGAAAAGTCACATACCGCGGAATCGTACACTTCGGACGCAAAGCCG   1099

BSNT_04841___   1100 AAGGCGCCCGCTCTAACATCGAGTGCGATACGCTCATTATGGATAACAAA   1149
                     |||||||||||||.||||||||||||||.|||||.||.|||||.||||||
BL02162___suf   1100 AAGGCGCCCGCTCAAACATCGAGTGCGACACGCTTATCATGGACAACAAA   1149

BSNT_04841___   1150 TCAACTTCAGACACAATTCCTTACAATGAAATCTTAAATGATAACATTTC   1199
                     ||||||||.||.|||||.||.|||||||||||.||.||.||.||||||||
BL02162___suf   1150 TCAACTTCTGATACAATCCCATACAATGAAATTTTGAACGACAACATTTC   1199

BSNT_04841___   1200 ATTGGAGCACGAAGCGAAAGTGTCTAAAGTATCTGAAGAGCAGCTCTTCT   1249
                     |||||||||||||||||||||.||.|||||||||||||||||||||||||
BL02162___suf   1200 ATTGGAGCACGAAGCGAAAGTATCAAAAGTATCTGAAGAGCAGCTCTTCT   1249

BSNT_04841___   1250 ACTTGATGAGCCGCGGTATTTCTGAAGAAGAAGCAACTGAAATGATCGTA   1299
                     |||||||||||||||||||||||||||||||||||||.|||||||||||.
BL02162___suf   1250 ACTTGATGAGCCGCGGTATTTCTGAAGAAGAAGCAACAGAAATGATCGTC   1299

BSNT_04841___   1300 ATGGGCTTCATCGAGCCATTCACAAAAGAGCTTCCAATGGAATACGCAGT   1349
                     |||||||||||||||||.|||||.|||||.||.||.||||||||||||||
BL02162___suf   1300 ATGGGCTTCATCGAGCCGTTCACGAAAGAACTGCCGATGGAATACGCAGT   1349

BSNT_04841___   1350 TGAAATGAACCGTTTGATTAAGTTCGAAATGGAAGGTTCTATAGGTTAA   1398
                     .||||||||||||.|.||.||||||||.||||||||.|||||.||||||
BL02162___suf   1350 CGAAATGAACCGTCTTATCAAGTTCGAGATGGAAGGGTCTATTGGTTAA   1398


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