Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04844 and BL02165
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence dna-align/BSNT_04844___yurX.1.5803.seq
# -bsequence dna-align/BL02165___yurX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04844___yurX-BL02165___yurX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04844___yurX-BL02165___yurX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04844___yurX
# 2: BL02165___yurX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1323
# Identity: 1049/1323 (79.3%)
# Similarity: 1049/1323 (79.3%)
# Gaps: 18/1323 ( 1.4%)
# Score: 4079.0
#
#
#=======================================
BSNT_04844___ 1 ATGACACTAGGTACAAAACTATCCGTAGATCAGGAGTATCTCAAAAGCTT 50
||||||.|.|..|||||||||||.|||||||.|||.|||.||||||||||
BL02165___yur 1 ATGACATTGGAAACAAAACTATCTGTAGATCGGGAATATGTCAAAAGCTT 50
BSNT_04844___ 51 TTCCGAAAAGCACCAAGAACCTGCCTGGCTG-AAGAACCTGCGCTTACAG 99
.||.||.||||||||.|||||.||.|||||| ||| |.||.||||||.|.
BL02165___yur 51 CTCTGAGAAGCACCAGGAACCGGCATGGCTGCAAG-ATCTACGCTTAGAA 99
BSNT_04844___ 100 GCTCTTGAACAAGCTGAGGATCTGCCGATGCCAAAACCTGACAAAACAAA 149
||.||||||.||||.||.|||||||||.||||.||||||||.||||||||
BL02165___yur 100 GCGCTTGAAAAAGCAGAAGATCTGCCGCTGCCGAAACCTGATAAAACAAA 149
BSNT_04844___ 150 AATCACAAACTGGAACTT--CACGAATTTCGCGAAGCATACAGTGGATAA 197
|||.|||||.|||||.|| |||| .||.|..||||||||.||.||.||
BL02165___yur 150 AATTACAAATTGGAATTTTACACG--GTTTGATAAGCATACTGTAGAAAA 197
BSNT_04844___ 198 CGAACCGCTTTCTTCATTAGAAGATTTGACTGATGAAGTAAAAGCGCTGA 247
..||||||||..|||.||.||.|||.|..|.|||||.||.|||.||||||
BL02165___yur 198 TAAACCGCTTGATTCTTTGGATGATCTTTCAGATGAGGTCAAATCGCTGA 247
BSNT_04844___ 248 TCGACGTTGAAAACGAAGATAAAACATTATACGTACAGCGTGACCAGACG 297
||||..|||.|||.|||||.|||||..|.||.||.|||.|.|||||||||
BL02165___yur 248 TCGATCTTGGAAATGAAGACAAAACGCTTTATGTCCAGAGAGACCAGACG 297
BSNT_04844___ 298 CCGGCATATCTTTCTCTTTCTCAAGAATTGAAAGACAAAGGCGTCATCTT 347
|||||.||.|||||||||||..||||..||.|.||.||||||||||||||
BL02165___yur 298 CCGGCTTACCTTTCTCTTTCAAAAGAGCTGCAGGATAAAGGCGTCATCTT 347
BSNT_04844___ 348 CACTGATATTCTGACTGC-TGCACGCGAGCACAGCGA-CTTGGTGGAGAA 395
.||.|||||||..||||| |.| |||||.|||.|||| ||| ||..|.||
BL02165___yur 348 TACAGATATTCATACTGCGTTC-CGCGAACACGGCGAGCTT-GTCAAAAA 395
BSNT_04844___ 396 ATACTTTATGAAGGACGGCGTGAAGGTTGACGAACATAAGTTAACTGCAC 445
.|||||||||||.||||||||.||.|..||.||.|||||.|||||||||.
BL02165___yur 396 GTACTTTATGAAAGACGGCGTAAAAGCCGATGAGCATAAATTAACTGCAT 445
BSNT_04844___ 446 TTCACGCGGCTCTTGTTAACGGAGGAGCATTCCTTTATGTTCCGAAAAAT 495
|.||.||.||.||..|.|||||.|||||.||||||||.||.||||||||.
BL02165___yur 446 TGCATGCAGCCCTCCTGAACGGCGGAGCCTTCCTTTACGTACCGAAAAAC 495
BSNT_04844___ 496 GTTCAGGTGGAGACGCCGGTTCAGGCTGTTTATGTCCACGAAAGCAATGA 545
||..||.||||..|.|||||.|||||||||||||||||.||||||||.||
BL02165___yur 496 GTCGAGCTGGAAGCTCCGGTGCAGGCTGTTTATGTCCATGAAAGCAACGA 545
BSNT_04844___ 546 TACAGCTCTATTCAACCACGTGCTGATTGTGGCTGAAGACCACAGCTCTG 595
||||.|.||.||||||||.||.||..|.||.||.||.|||.||||..|.|
BL02165___yur 546 TACAACGCTTTTCAACCATGTACTTGTCGTTGCAGATGACAACAGTGCCG 595
BSNT_04844___ 596 TCACATATGTAGAAAACTACATCAGCACTGTAAACCCGAAAGACGCTGTC 645
||||||||||||||||||||||||||||.||.||.||.||.||.||.|||
BL02165___yur 596 TCACATATGTAGAAAACTACATCAGCACGGTGAATCCTAAGGAAGCGGTC 645
BSNT_04844___ 646 TTCAATAT--TATCAGTGAGGTCATCACAGGTGATAATGCCAGCGTGACA 693
||.||.|| |.||| ||.||.||||||||.|..||||||.|||||..|
BL02165___yur 646 TTTAACATCGTGTCA--GAAGTGATCACAGGCGCGAATGCCCGCGTGCAA 693
BSNT_04844___ 694 TACGGTGCGGTGGATAATCTGTCAAGC-GGTGTGACAACTTATGTGAACC 742
|||||.||.||.||.||.||.|| .|| ||.||.||..|||||||.|.||
BL02165___yur 694 TACGGAGCCGTCGACAACCTTTC-CGCAGGGGTAACGGCTTATGTCAGCC 742
BSNT_04844___ 743 GCCGCGGTGCTGCGCGCGGACGCGACAGCAAAATCGAGTGGGCTCTTGGC 792
|||||||..||||.|.||||||||||||||||||.||.|||||.||.||.
BL02165___yur 743 GCCGCGGAACTGCACTCGGACGCGACAGCAAAATTGAATGGGCGCTCGGT 792
BSNT_04844___ 793 CTGATGAACGACGGCGACACGATTTCCGAAAATACAACAAACCTTTACGG 842
.|||||||.|||||.|||||.|||||.|||||.||.||.||.||..|.||
BL02165___yur 793 TTGATGAATGACGGAGACACCATTTCTGAAAACACGACGAATCTGCATGG 842
BSNT_04844___ 843 TGACGGCACATACGGTGATACGAAAACGGTTGTTGTCGGAAGAGGAGAGC 892
.||||||||||.|||.|||||||||||||||||.|||||.||||||||.|
BL02165___yur 843 AGACGGCACATTCGGCGATACGAAAACGGTTGTCGTCGGCAGAGGAGAAC 892
BSNT_04844___ 893 AAACAGAAAACTTCACAACACAAATCATCCATTTCGGTAAAGC-TTCTGA 941
|.||..|||||||.|||||.||||||||.||...||| ||||| |||.||
BL02165___yur 893 AGACTCAAAACTTTACAACGCAAATCATTCACCACGG-AAAGCATTCAGA 941
BSNT_04844___ 942 AGGCTATATCTTGAAGCACGGTGTGATGAAGGATTCCGCTTCTTCTATCT 991
|||||||||.||.||.|||||.||.|||||.||||||||.|||||.||||
BL02165___yur 942 AGGCTATATTTTAAAACACGGCGTTATGAAAGATTCCGCGTCTTCGATCT 991
BSNT_04844___ 992 TTAACGGAATCGGCAAAATCGAACATGGCGCTTCTAAAGCGAATGCGGAG 1041
|.|||||.|||||.||.|||||.||.|||||.||.|||.|.|||||.|||
BL02165___yur 992 TCAACGGTATCGGAAAGATCGAGCACGGCGCGTCAAAATCAAATGCAGAG 1041
BSNT_04844___ 1042 CAAGAATCACGCGTGCTGATGCTTAGCGAAAAAGCACGCGGAGACGCAAA 1091
||.||.||||||||.||.|||||.||.||||||||.|||||.||||||||
BL02165___yur 1042 CAGGAGTCACGCGTTCTTATGCTGAGTGAAAAAGCGCGCGGCGACGCAAA 1091
BSNT_04844___ 1092 CCCTATTCTTTTAATTGACGAAGACGATGTAACTGCAGGACATGCGGCAT 1141
|||.||.||.|||||.||.||||||||||||||.||||||||.||.||||
BL02165___yur 1092 CCCGATCCTATTAATCGATGAAGACGATGTAACGGCAGGACACGCTGCAT 1141
BSNT_04844___ 1142 CTGTCGGCCGTGTGGACCCTATTCAGCTTTACTACCTGATGAGCCGCGGG 1191
||||||||||.||.||.||..|||||||.|||||..|||||||||||||.
BL02165___yur 1142 CTGTCGGCCGCGTCGATCCGGTTCAGCTCTACTATTTGATGAGCCGCGGA 1191
BSNT_04844___ 1192 ATTCCGAAAGAAGAAGCAGAACGCTTAGTCATTTACGGATTCCTTGCACC 1241
|||||.||||||||||||||.|||.|.|||||||||||.|||||.|||||
BL02165___yur 1192 ATTCCTAAAGAAGAAGCAGAGCGCCTCGTCATTTACGGCTTCCTCGCACC 1241
BSNT_04844___ 1242 GGTAGTAAATGAACTTCCGATTGAAGGCGTTAAGAAACAATTAGTTTCTG 1291
|||.||.|||||||||||||||||||||||.|||||.||..|.||.||||
BL02165___yur 1242 GGTTGTCAATGAACTTCCGATTGAAGGCGTGAAGAAGCAGCTGGTCTCTG 1291
BSNT_04844___ 1292 TTATCGAAAGGAAAGTGAAGTAA 1314
|.||.|||||||||||.||.|||
BL02165___yur 1292 TGATTGAAAGGAAAGTAAAATAA 1314
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