Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04851 and BL02168
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:03
# Commandline: needle
# -asequence dna-align/BSNT_04851.1.5803.seq
# -bsequence dna-align/BL02168___yurZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04851-BL02168___yurZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04851-BL02168___yurZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04851
# 2: BL02168___yurZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 195/403 (48.4%)
# Similarity: 195/403 (48.4%)
# Gaps: 149/403 (37.0%)
# Score: 570.5
#
#
#=======================================
BSNT_04851 1 TTGAATCAAGACAGAGGAAGCATG---CAGGACGCGTTA---AAAC---- 40
.|||||| |||||| |||.|.||.||| ||.|
BL02168___yur 1 GTGAATC-----------AGCATGAATCAGAAGGCATTATCGAATCCGCA 39
BSNT_04851 41 -------AATATAAACATGGTTTAGGCACATTT---GAACAAAA------ 74
|||||||....||..|.||||..||| ||| ||||
BL02168___yur 40 CTGCACGAATATAAGGCGGGGATCGGCATCTTTTCCGAA-AAAATGCCCG 88
BSNT_04851 75 GA--TGCCGCTGATGGGAAGAAAATTTAACGAATTTACTGAACAGTGCTT 122
|| |||||| .||||..|||||||||||.|||.|||||||
BL02168___yur 89 GAATTGCCGC----------CAAATACAACGAATTTACCGAAGAGTGCTT 128
BSNT_04851 123 T------GCCGGGAATTCTCTGACTGAAAGAGAAAAACAGCTGATCGCCC 166
| |.||.| ||.|..||||..||.||.|||||||||||.|
BL02168___yur 129 TAAAAAAGGCGTG------CTCAGCGAAAAGGATAAGCAGCTGATCGCAC 172
BSNT_04851 167 TCGGAATTGCCA---TCAATGCTCAGGACGAATATTGCATGATCTATCAT 213
|.||.|| || |||||.|.|||||.|||||||||||.||.|||||.
BL02168___yur 173 TGGGCAT---CAGTGTCAATACGCAGGATGAATATTGCATTATTTATCAC 219
BSNT_04851 214 ACAAAAGGCTGTCTCGATCAGGGAGCGACAGAAGAAAACATTCTCGAAGC 263
|..||.|||||.||.|||...|||||..|.||.|||.|.|||||.||.||
BL02168___yur 220 ATCAAGGGCTGCCTGGATTGCGGAGCATCGGAGGAAGAAATTCTTGAGGC 269
BSNT_04851 264 CGTCAGTGTGGCAGCGGCATTTTAA------------------------- 288
.|||.||||..|.||.||||||
BL02168___yur 270 AGTCGGTGTAACTGCTGCATTT---GGCGGAGGCGCAGCCATGAGCCAAG 316
BSNT_04851 288 -------------------------------------------------- 288
BL02168___yur 317 CCGTCACGCTCGTTTTGCAGGCGATGGAAGAATTCCAGCAGATGAAGCAT 366
BSNT_04851 288 --- 288
BL02168___yur 367 TGA 369
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