Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04859 and BL02173

See Amino acid alignment / Visit BSNT_04859 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence dna-align/BSNT_04859___yusE.1.5803.seq
#    -bsequence dna-align/BL02173___yusE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04859___yusE-BL02173___yusE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04859___yusE-BL02173___yusE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04859___yusE
# 2: BL02173___yusE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     224/330 (67.9%)
# Similarity:   224/330 (67.9%)
# Gaps:          30/330 ( 9.1%)
# Score: 745.5
# 
#
#=======================================

BSNT_04859___      1 ATGAAAGAACTCCAAGAACACGAACTCGATCACATTGAAGATGA----TG     46
                     |||.|||||||.||||||.|.||.||..|.|...|.||..||||    ||
BL02173___yus      1 ATGCAAGAACTTCAAGAAAAAGAGCTAAAACGGCTAGAGCATGAAACTTG     50

BSNT_04859___     47 TGTACCTTCTATATTTATATACTCCGTTTTGCGGCACCTGCCAGCTTGCA     96
                     |    |||||||||.||||.||.|||||.|||||.||.||.|||||.||.
BL02173___yus     51 T----CTTCTATATGTATACACGCCGTTCTGCGGAACGTGTCAGCTGGCC     96

BSNT_04859___     97 AGCAAAATGCTGACAGTGGTGAAAGAAATGCTGCCGGATGTCGCCTTCTA    146
                     .|.|.|||||||...||.||..|.||||||.||..|||..|..|.||.||
BL02173___yus     97 GGAAGAATGCTGGAGGTCGTTGATGAAATGATGAAGGACATTCCTTTTTA    146

BSNT_04859___    147 TCAAAACAATGTCAATTACTCTCCGACATTCGCAAAAGCGTATCAAATTG    196
                     |.||||||||.||||||||||.|||.||||.||.|||..|.|..||||||
BL02173___yus    147 TAAAAACAATCTCAATTACTCCCCGTCATTTGCCAAACAGCAGGAAATTG    196

BSNT_04859___    197 AAAGCGTCCCTTGTTTTCTGCTGTTTAAAGGCGGAAAG-----GTGGTCG    241
                     ||||||||||.||||||.|.||.|..|||     ||||     ||.|||.
BL02173___yus    197 AAAGCGTCCCGTGTTTTATCCTTTACAAA-----AAAGGGCGAGTCGTCA    241

BSNT_04859___    242 AAAGAGGATATGCATTTCATTCCGTTTCTTATTTATATGAGCTGATCAAA    291
                     |||.||.|||.||.|||||.||||||||.||.||||||||...|||.|||
BL02173___yus    242 AAAAAGAATACGCTTTTCACTCCGTTTCCTACTTATATGATACGATTAAA    291

BSNT_04859___    292 CAAAAATCATCTTCCGCATCCCATTTATGA    321
                     ||||    |||||..|     .|||.|   
BL02173___yus    292 CAAA----ATCTTGTG-----GATTAA---    309


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.