Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01406 and BL02185
See
Amino acid alignment /
Visit
BSNT_01406 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_01406___yfiZ.1.5803.seq
# -bsequence dna-align/BL02185___yfiZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01406___yfiZ-BL02185___yfiZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01406___yfiZ-BL02185___yfiZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01406___yfiZ
# 2: BL02185___yfiZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1053
# Identity: 710/1053 (67.4%)
# Similarity: 710/1053 (67.4%)
# Gaps: 102/1053 ( 9.7%)
# Score: 2259.5
#
#
#=======================================
BSNT_01406___ 1 ATGATCTGCAAAAAGGCATCTTCAAAAT------GGATTGTGTTAGTA-T 43
|||.||| .||.||.|.|| |||| .|||.| .|.|| |
BL02185___yfi 1 ATGCTCT-TAAGAACGAAT-----AAATATAGAACGATCG---CACTACT 41
BSNT_01406___ 44 GTCTGATTTTCATTTTACTG------GCGGCTGTCTGCGCAAGCGTCGTG 87
||| |||.|||||..|| ||.||.||.|||||.||..||||.
BL02185___yfi 42 GTC----TTTTATTTTGGTGCTGGCTGCCGCCGTTTGCGCCAGTATCGTA 87
BSNT_01406___ 88 TACGGCTATACAGGTACGTCATGG-AGACAGGTCTATCAGGCGTTTACTT 136
|||||.|||||...|||||||||| .|| .||.|||..||||.|||||..
BL02185___yfi 88 TACGGTTATACGAATACGTCATGGTCGA-TGGCCTACAAGGCTTTTACCG 136
BSNT_01406___ 137 CCTTCAACGGAACAAATGAGCATGTCATCATCAAGGATGTCAGGCTTCCG 186
.|||||.|||..|.|||||.|||.|..|||||||..|.||..|..|.|||
BL02185___yfi 137 GCTTCAGCGGCTCTAATGAACATCTTGTCATCAAAAACGTGCGTTTGCCG 186
BSNT_01406___ 187 CGCGCTTTGGTTGCCACAGTTGTCGGCGCCTCGCTTGCAGCCGCGGGCGC 236
|||||..||.||||..||..||||||.||.||.||.|..|..||.|||||
BL02185___yfi 187 CGCGCGCTGATTGCTGCAACTGTCGGTGCTTCCCTCGGGGTTGCCGGCGC 236
BSNT_01406___ 237 CCTCATGCAGGCGCTTACAAAAAATCCGCTTGCGTCACCGGGCATTTTCG 286
..|.|||||||||.|.||||||||.||||||||.||.|||||.|||||||
BL02185___yfi 237 TTTAATGCAGGCGATGACAAAAAACCCGCTTGCTTCCCCGGGAATTTTCG 286
BSNT_01406___ 287 GGATTAACGCCGGTGCAGGTTTTTTTATTGTTGCCGGATCG--TTTTTTC 334
|..|.|||||.|||||.|||||.|||.||||| |||.|| .||||||
BL02185___yfi 287 GCGTGAACGCGGGTGCCGGTTTCTTTGTTGTT---GGAGCGCTGTTTTTC 333
BSNT_01406___ 335 TGCATATTCA------GTCACCTCAGGC-ATTAGTATGGAGCTCGTTTCT 377
| |||| .||.|.||||.| ||| |.|||||.|||.|||.|
BL02185___yfi 334 T-----TTCACGTCGGTTCGCTTCAGACGATT-GCATGGATCTCTTTTTT 377
BSNT_01406___ 378 GGGGGCAGCATTTACCGC---TGCGATCGTCTATGCAGCAGGCTCGCTTG 424
.||.|||||.|||.|||| || ||||||||...|..|||||.||.|
BL02185___yfi 378 CGGTGCAGCGTTTGCCGCGCTTG---TCGTCTATTTTGTCGGCTCTCTCG 424
BSNT_01406___ 425 GAAGAGAAGGACTGACGCCAATCAAACTGACGCTGGCGGGAGCTGCCATG 474
||||.|||||.||||||||..||||.||||||||.||.||.||.||.|||
BL02185___yfi 425 GAAGGGAAGGGCTGACGCCGGTCAAGCTGACGCTTGCAGGGGCGGCGATG 474
BSNT_01406___ 475 GCAGCCATGTTTTCTTCTCTGACACAAGGCTTGCTTTCTGTCAACGAACT 524
.||||..||||.||.||..||||.|||||..|||||||.||.||.|||..
BL02185___yfi 475 TCAGCGCTGTTCTCATCATTGACGCAAGGGATGCTTTCCGTTAATGAAGC 524
BSNT_01406___ 525 CGAGCTTGCCCAGGTGCTTTTTTGGCTGACTGGCTCTGTGCAGGGCCG-- 572
.|..||||..||||.|||.||||||||..|.||||||||.|||||.||
BL02185___yfi 525 AGCCCTTGAGCAGGCGCTGTTTTGGCTTGCGGGCTCTGTCCAGGGGCGCG 574
BSNT_01406___ 573 ------GAGTCTGGATCT--GTTGATGACGATGTTTCCATA-----TGCA 609
|..|||.|.||| ||| .||||||| |||
BL02185___yfi 575 ACCTCAGCCTCTTGGTCTCCGTT----------CTTCCATATATCGTGC- 613
BSNT_01406___ 610 GCGGCAGCGCTGGTAATCTGCTTCTTTCTCGG--CCAAAA--AA----TT 651
||||| .|..|.|||.||||.||.||.|| |||||| || ||
BL02185___yfi 614 -CGGCA---TTCATCATCAGCTTTTTGCTAGGATCCAAAATCAATGTCTT 659
BSNT_01406___ 652 AACCTCCTCGTTATGGGAGAAGATGTGGCAAAAGGACTCGGCCAAAAAAC 701
||| .|||||.||.||.|||||||||.|.||||||||||||||
BL02185___yfi 660 AAC--------AATGGGGGAGGAAGTGGCAAAAAGCCTCGGCCAAAAAAC 701
BSNT_01406___ 702 GGGCCTGCTGAAATTTGTGATGGCGCTTTGTGTTGTCATGCTTGCAGGGT 751
|.|.|||.|.|||....||||||||.|||...|||||.||||.||.|||.
BL02185___yfi 702 GTGGCTGATTAAAGCGCTGATGGCGGTTTCGATTGTCCTGCTAGCCGGGG 751
BSNT_01406___ 752 CCGCTGTCGCCATTGCCGGGCCGATTTCTTTTATCGGCATCATTATTCCG 801
...||||||||.|.|||||||||||....|||||||||||..|.||.|||
BL02185___yfi 752 GATCTGTCGCCGTGGCCGGGCCGATCGGCTTTATCGGCATTGTCATCCCG 801
BSNT_01406___ 802 CATTTTGCCCGCTTTGTCGTTGGTAATGATTATCGCTGGGTTCTGCCATT 851
||||||||....|||.||||.||..|.||..|||||||||||||.||.|.
BL02185___yfi 802 CATTTTGCTAAATTTATCGTCGGGCACGACCATCGCTGGGTTCTTCCGTA 851
BSNT_01406___ 852 TTCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGC 901
.|.|||.||..|.||.|||||..||||.|||..|||.||.||.||.||..
BL02185___yfi 852 CTGCGCCGTGCTTGGAGCCATCCTGCTCGTTACCGCAGACATTGGCGCAA 901
BSNT_01406___ 902 GATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATC 951
|.||..|.||.||||||.|.|||||.||||||||.||||||||.||||||
BL02185___yfi 902 GGTACCTGATCATGCCTGAAGAAGTACCTGTCGGCGTCATGACAGCCATC 951
BSNT_01406___ 952 ATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGG--GCGAAGCTA 999
||.||.|..||..|.|||||.||.|||||.||||||||| .|.|| .|
BL02185___yfi 952 ATTGGGACACCCATTTTTGTCTATATCGCGAGAAGGGGGTTCCAAA--AA 999
BSNT_01406___ 1000 TGA 1002
|||
BL02185___yfi 1000 TGA 1002
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.