Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00770 and BL02189
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence dna-align/BSNT_00770___ydbJ.1.5803.seq
# -bsequence dna-align/BL02189___ydbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00770___ydbJ-BL02189___ydbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00770___ydbJ-BL02189___ydbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00770___ydbJ
# 2: BL02189___ydbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 997
# Identity: 645/997 (64.7%)
# Similarity: 645/997 (64.7%)
# Gaps: 140/997 (14.0%)
# Score: 1898.5
#
#
#=======================================
BSNT_00770___ 1 ATG-----GCTGAGCCGATTTTACATATTGAAGGCCTCGATAAAAAGATT 45
||| || ||||..||||||||||.|||....|.|||||||..||.
BL02189___ydb 1 ATGACAAAGC--AGCCTGTTTTACATATAGAAAATGTTGATAAAATCATA 48
BSNT_00770___ 46 G--GGTCTAAACAGATTTTAAAACAGATCAGCAT------GGATGTCATG 87
| || |.|||| |||.||.|||.|.|||.||.| ||||
BL02189___ydb 49 GACGG-CAAAAC-GATATTGAAAGATATCCGCTTAACGGCGGAT------ 90
BSNT_00770___ 88 GAGGGTGAAATCATCGGCCTACTCGGTCCGAATGGTTCCGGAAAAACAAC 137
||.||.||.||||||||.||.||.||||||||.||.||.||||||||.||
BL02189___ydb 91 GAAGGGGAGATCATCGGTCTGCTTGGTCCGAACGGATCAGGAAAAACGAC 140
BSNT_00770___ 138 ACTCATC----CGTATCATCGTCGGGCTGCTGAAACAA----AACAGCGG 179
.|||||| .| ||||.|| |.|.||.||| ||.|||||
BL02189___ydb 141 CCTCATCAAATTG-ATCACCG-------GTTTAATCAAAATGAAGAGCGG 182
BSNT_00770___ 180 ---AAGCGTGACAATCAGCGGATTCCAGCATGAT--ACAG--AGTTTGAA 222
||..||.|.||.|.|| .|||| ||| ||.| |.||||||
BL02189___ydb 183 ATCAATTGTCATAAACGGC--TTTCC-----GATTGACCGCCAATTTGAA 225
BSNT_00770___ 223 AAAGCGATGGAAGCGGTTGGAGCGATTGTTGAGAACCCTGAGTTCTATCC 272
||||||||..|..|.||.|||||.|||||.||.||.|||||.||||||||
BL02189___ydb 226 AAAGCGATCCAGTCCGTCGGAGCCATTGTAGAAAATCCTGAATTCTATCC 275
BSNT_00770___ 273 GTACCTGACAGGCTGGGAAAACCTCAAGCACTTTGCGAATATGCACAAAA 322
|||.||||||||||..|||||.||.|||||||.|||.|||||||||....
BL02189___ydb 276 GTATCTGACAGGCTATGAAAATCTGAAGCACTATGCAAATATGCACGCTG 325
BSNT_00770___ 323 AAATAGCGGA--TGAACGGCTTGATGAAGTGGT--GGAACGTGTCGG--- 365
.||| |||| .|||.|.||.||.|||||..| |.| |.|||||
BL02189___ydb 326 GAAT--CGGACGGGAAAGACTGGAGGAAGTCATCAGCA--GAGTCGGCCT 371
BSNT_00770___ 366 ----GCTGACGTCAGCGATTCATGATAAGGTAAAAACCTATTCCCTTGGG 411
|.||.|| ||| |.||.|||||.|||||.||.||.|||||.
BL02189___ydb 372 TGAAGATGCCG-CAG------AAGACAAGGTCAAAACATACTCGCTTGGA 414
BSNT_00770___ 412 ATGCGCCAGCGTCTGGGGATCGCCCAGGCAATTCTTCACCGGCCGAAGCT 461
|||...|||||.||.||.||.||||||||.||||||||||||||.||.||
BL02189___ydb 415 ATGAAACAGCGCCTCGGTATTGCCCAGGCGATTCTTCACCGGCCAAAACT 464
BSNT_00770___ 462 CCTCATTCTAGATGAACCGACAAACGGCCTAGACCCTGCGGGGATGAAGG 511
.||.|||.|.||.||.|||||.|||||..|.|||||.|||||.|||||.|
BL02189___ydb 465 GCTGATTTTGGACGAGCCGACGAACGGATTGGACCCGGCGGGAATGAAAG 514
BSNT_00770___ 512 ATTTTCGCGATCATATTAAAGAGCTCGCAGAAATGGAAGGAACAGCTGTC 561
||||.|||||.||..|....||.|||||.|||...||||||||.||..||
BL02189___ydb 515 ATTTCCGCGAACACTTGCGTGAACTCGCCGAAGAAGAAGGAACGGCGATC 564
BSNT_00770___ 562 CTGTTCGCCACTCATTTATTGCGCGAGGTTGAAGACTTGTGCGACCGTGT 611
|||||.||.|||||.||..||...||.||.|||||.||.||||||||.||
BL02189___ydb 565 CTGTTTGCGACTCACTTGCTGAAGGAAGTGGAAGATTTATGCGACCGGGT 614
BSNT_00770___ 612 CATTATCATTCAAAAAGGTGAGATCAAAGCGGAA-----GTCAGCTTA-- 654
|.|.|||.||||||||||..|.||||||.| || ||| ||||
BL02189___ydb 615 CGTCATCCTTCAAAAAGGGAAAATCAAATC--AACTGTCGTC--CTTAAT 660
BSNT_00770___ 655 CAAG-------GAACTGGCCAAACCACA-GAAAAAGCGATTATAGAAGTG 696
|||| ||| ||| |||||.|||||..|.||.||.
BL02189___ydb 661 CAAGCGGACGAGAA-----------ACAGGAAAAGGCGATGCTGGAGGTA 699
BSNT_00770___ 697 CAGCCGCAAGAAAAAGCGCTCAATTGGCTGACAGGCAATCAATATCAAGC 746
|||||.||.||.||||||||..|.|||||||.||.|.|...|||..||||
BL02189___ydb 700 CAGCCTCATGACAAAGCGCTTCAGTGGCTGAAAGACCAAGGATACGAAGC 749
BSNT_00770___ 747 TGAGAGCCAAGACGGGACGATTGTAGTTGAGGTGGCAAAAGAAA----AC 792
|...|.|.||.|.||...|.|||..||..|||||| ||||| |.
BL02189___ydb 750 TCGCACCGAAAAAGGCCTGCTTGCCGTAAAGGTGG----AGAAAGCGCAA 795
BSNT_00770___ 793 ATACCGGAGC-TGAACCGATCA----CTTGTCGGACAA-GATCTGAATGT 836
||.||| || |.|| |||| |||||| |.||| |||.|..|.||
BL02189___ydb 796 ATTCCG--GCTTTAA---ATCAACAGCTTGTC-GCCAATGATATTGACGT 839
BSNT_00770___ 837 ATTTTCCATTACGCCTTACACGCAGTCACTGGAAGACGAATTTATAAAAG 886
.|.|||.||..|.||.|..|.||||||.||.||.||.||||.||| .|
BL02189___ydb 840 CTATTCGATCGCTCCGTTTAAGCAGTCTCTTGAGGATGAATATAT---GG 886
BSNT_00770___ 887 C---GACAACAGCTCAT-CAAGAGGAGGGAGAAGAGCT--TGTCTAA 927
| |||.| || .||.||.||.|||.|..||| |||.|||
BL02189___ydb 887 CGCGGACGA------ATGGAATAGAAGAGAGGAATGCTGATGTTTAA 927
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