Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00774 and BL02191

See Amino acid alignment / Visit BSNT_00774 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence dna-align/BSNT_00774___ydbL.1.5803.seq
#    -bsequence dna-align/BL02191___ydbL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00774___ydbL-BL02191___ydbL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00774___ydbL-BL02191___ydbL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00774___ydbL
# 2: BL02191___ydbL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     248/345 (71.9%)
# Similarity:   248/345 (71.9%)
# Gaps:          15/345 ( 4.3%)
# Score: 828.5
# 
#
#=======================================

BSNT_00774___      1 TTGAGGAACTTTATTACCGCTTTACCGATTGTATTGCTGCTTGGATTCTC     50
                     .|||..||.||||||||.||.||.|||||||||||||||||...|||.||
BL02191___ydb      1 ATGAAAAAGTTTATTACGGCGTTGCCGATTGTATTGCTGCTGTCATTTTC     50

BSNT_00774___     51 ATTTGTGTCATTCATG--TTTCAGTTTGAACATCTTGTTTATTTCAGGCT     98
                     ||||||.||.||  ||  |||.|.|||||.|||||.||.|||||.||.||
BL02191___ydb     51 ATTTGTTTCTTT--TGCCTTTAACTTTGATCATCTCGTATATTTTAGACT     98

BSNT_00774___     99 CGCGCTTGGGTTGTTTTCTCTCGTGGGACTGTACATGATATATAAAATGA    148
                     .|||||.||..|.|||||.||.|..||..|||...||.||||||||.|||
BL02191___ydb     99 TGCGCTCGGACTATTTTCGCTTGCAGGTTTGTTTCTGTTATATAAATTGA    148

BSNT_00774___    149 AGACGGGCATCCGCTATTTTAT--CATCTATCTGTATGCCAGCTGGATTG    196
                     |.|..|||.|||||...|||||  ||  ||.||.||||..||||||||.|
BL02191___ydb    149 AAAACGGCGTCCGCCTCTTTATGGCA--TACCTTTATGGAAGCTGGATCG    196

BSNT_00774___    197 TGTTGGCCGCAGTGACCGCTTTTGAAGAGCCGATTTTCTCAAGCTTT-TT    245
                     ||.||||||.|.|..||||.|.||||||.|||.||||.|| .|.||| ||
BL02191___ydb    197 TGCTGGCCGGAATCGCCGCATATGAAGAACCGCTTTTTTC-CGATTTCTT    245

BSNT_00774___    246 CTTTGGCGGCCTGGTGATGACGATGGGTTACCTGACATATATGCTGATTT    295
                     |||.||||||||...|||.||||||||.|||.|.||.||.||||||||||
BL02191___ydb    246 CTTCGGCGGCCTCACGATCACGATGGGCTACTTAACCTACATGCTGATTT    295

BSNT_00774___    296 ATCTCGGCATGAAACAAGACCG----GGATGCAAATCCTGTGTAA    336
                     |||||||.|||||....|||||    ||..|..||.|| ||.||.
BL02191___ydb    296 ATCTCGGTATGAAGGTTGACCGCCGCGGCGGTCAAGCC-GTTTAG    339


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