Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00799 and BL02203
See
Amino acid alignment /
Visit
BSNT_00799 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence dna-align/BSNT_00799___rsbS.1.5803.seq
# -bsequence dna-align/BL02203___rsbS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00799___rsbS-BL02203___rsbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00799___rsbS-BL02203___rsbS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00799___rsbS
# 2: BL02203___rsbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 282/366 (77.0%)
# Similarity: 282/366 (77.0%)
# Gaps: 0/366 ( 0.0%)
# Score: 1074.0
#
#
#=======================================
BSNT_00799___ 1 TTGAGACATCCGAAAATCCCGATCTTGAAACTGTATAATTGCTTATTAGT 50
|||||....||.||.||.||.||.|||||.||||||||.||.|||||.||
BL02203___rsb 1 TTGAGGGTACCTAACATTCCAATTTTGAAGCTGTATAACTGTTTATTGGT 50
BSNT_00799___ 51 ATCCATTCAATGGGAACTTGATGACCAGACAGCATTAACTTTTCAAGAAG 100
||||||||||...||.||.||||||||.||.||..|.|..||.|||||.|
BL02203___rsb 51 ATCCATTCAAGTAGAGCTCGATGACCAAACCGCTCTGAAATTCCAAGAGG 100
BSNT_00799___ 101 ACTTATTAAATAAAATATACGAAACAGGTGCTAACGGAGTCGTCATTGAC 150
||.|..|.||.||||||||.|||||.|||.|.||||||||.||.||.||.
BL02203___rsb 101 ACCTGCTGAACAAAATATATGAAACCGGTTCGAACGGAGTGGTGATCGAT 150
BSNT_00799___ 151 CTGACATCTGTGGATATGATTGATTCATTTATCGCGAAAGTGCTGGGCGA 200
|||||.||.|||||.||.||.||||||||.|||||.|||||.||.|||||
BL02203___rsb 151 CTGACTTCAGTGGACATCATCGATTCATTCATCGCCAAAGTCCTTGGCGA 200
BSNT_00799___ 201 CGTCATTACAATGTCTAAGTTAATGGGGGCTAAAGTCGTCTTGACCGGCA 250
.||||||||||||||.||..|.|||||.||.||||||||..||||.||||
BL02203___rsb 201 TGTCATTACAATGTCAAAACTGATGGGCGCCAAAGTCGTTCTGACTGGCA 250
BSNT_00799___ 251 TTCAGCCCGCTGTGGCAGTGACGCTGATTGAACTTGGAATCGCGCTTGAG 300
|.|||||.|||||.||.|||||..||||||||||.||.||..|..|.||.
BL02203___rsb 251 TCCAGCCGGCTGTTGCGGTGACATTGATTGAACTCGGCATTTCTTTGGAC 300
BSNT_00799___ 301 GAAATCGAAACTGCGCTCGACTTAGAGCAGGGGCTTGAGACATTGAAGCG 350
||.|||||.||.||||||||..|.||..|||||||.|||||||||.||||
BL02203___rsb 301 GAGATCGAGACGGCGCTCGATCTCGAAAAGGGGCTCGAGACATTGCAGCG 350
BSNT_00799___ 351 GGAATTGGGGGAATAG 366
|||||||||||||||.
BL02203___rsb 351 GGAATTGGGGGAATAA 366
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.