Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00802 and BL02206

See Amino acid alignment / Visit BSNT_00802 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence dna-align/BSNT_00802___rsbV.1.5803.seq
#    -bsequence dna-align/BL02206___rsbV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00802___rsbV-BL02206___rsbV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00802___rsbV-BL02206___rsbV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00802___rsbV
# 2: BL02206___rsbV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     233/339 (68.7%)
# Similarity:   233/339 (68.7%)
# Gaps:          21/339 ( 6.2%)
# Score: 730.5
# 
#
#=======================================

BSNT_00802___      1 ATGAATATAAATGTTGATGTGAAGCAAAACGAGAATGATATACAAGTAAA     50
                     .|||||.|....||||||..|||..||||.||..|||..|||.|||||||
BL02206___rsb      1 GTGAATTTGGCAGTTGATACGAATAAAAATGACCATGTGATAGAAGTAAA     50

BSNT_00802___     51 CATTGCAGGAGAAATTGATGTATACTCAGCCCCGGTGCTTAGAGAGAAGC    100
                     ..||||.||.||||||||.||..||.|.||.||....||..|.||..|||
BL02206___rsb     51 AGTTGCGGGCGAAATTGACGTGCACACGGCTCCAACACTGCGGGATGAGC    100

BSNT_00802___    101 TCGTTCCTCTGGCAGAACAAGGAGCTGA-CTTAAGAATTTGCCTGAAAGA    149
                     |..|.||.||.||.|||.|||||...|| ||.|| |.||.|.||||||||
BL02206___rsb    101 TGATGCCGCTCGCGGAAGAAGGAAAAGATCTCAA-AGTTAGTCTGAAAGA    149

BSNT_00802___    150 --TGTCAGCTACATGGACAGTACCGGATTGGGCGTTTTTGTAGGGACCTT    197
                       |.|||  ||.||||||||.||.||..||||.||.||.||.||  |.||
BL02206___rsb    150 CGTTTCA--TATATGGACAGCACAGGGCTGGGTGTATTCGTCGG--CATT    195

BSNT_00802___    198 TAAAATGGTGAAAAAACAA--GGTGGTTC----GCTGAAACTTGAAAATC    241
                     ||.||.|..|.|||.|.||  ||.|||||    | ||   ||||||||||
BL02206___rsb    196 TACAAAGCGGTAAACAGAACTGGGGGTTCTTTAG-TG---CTTGAAAATC    241

BSNT_00802___    242 TTTCTGAACGGCTGATCCGACTGTTTGACATTACAGGCTTGAAGGACATC    291
                     |.||.||.||..||||.||..|||||||.||||||||.||.|||||||||
BL02206___rsb    242 TGTCAGAGCGTTTGATTCGTTTGTTTGATATTACAGGTTTAAAGGACATC    291

BSNT_00802___    292 ATTGATATTTCTGCAAAGTCAGAAGGTGGAGTGCAATGA    330
                     |||||.|||||||.|||||||||.||||||.|..||   
BL02206___rsb    292 ATTGACATTTCTGGAAAGTCAGAGGGTGGATTATAA---    327


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