Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00803 and BL02207
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence dna-align/BSNT_00803___rsbW.1.5803.seq
# -bsequence dna-align/BL02207___rsbW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00803___rsbW-BL02207___rsbW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00803___rsbW-BL02207___rsbW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00803___rsbW
# 2: BL02207___rsbW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 499
# Identity: 377/499 (75.6%)
# Similarity: 377/499 (75.6%)
# Gaps: 29/499 ( 5.8%)
# Score: 1413.0
#
#
#=======================================
BSNT_00803___ 1 ATGAAGA-ATAATGCTGATTACATCGAAATGAAAGT-GCCGGCCCAACCT 48
||||||| |..| |||||||||||.|||||| |||| .||.|||.||||.
BL02207___rsb 1 ATGAAGAGAGCA-GCTGATTACATTGAAATG-AAGTCACCTGCCAAACCA 48
BSNT_00803___ 49 GAATATGTGGGAATTATAAGACTGACGCTGTCAGGGGTCGCAAGCAGAAT 98
|||||.||.|||||.||..|..|.||.|||||.|||.|.|||||||..||
BL02207___rsb 49 GAATACGTAGGAATCATTCGTTTAACCCTGTCGGGGATTGCAAGCAAGAT 98
BSNT_00803___ 99 GGGCTATACGTACGATGAAATTGAAGACTTGAAAATCGCAGTCAGTGAGG 148
|||.|||.|.||.|||||.||.||||||||||||||.||.|||||.||.|
BL02207___rsb 99 GGGGTATTCTTATGATGACATCGAAGACTTGAAAATTGCGGTCAGCGAAG 148
BSNT_00803___ 149 CGTGCACAAATGCGGTTCAGCACGCTTACAAAGAAGATAAAAA---TGGG 195
||||||||||.||.||.|||||.|||||.||||.|||.||.|| .||.
BL02207___rsb 149 CGTGCACAAACGCTGTGCAGCATGCTTATAAAGCAGACAACAACACAGGA 198
BSNT_00803___ 196 GAAGT----GTCAATACGATTCGGTGTGTTTGAAGACCGTTTAGAGGTTA 241
||.|| |||| |||||||.|||||.||||||||..|.||..|..
BL02207___rsb 199 GAGGTCTCCGTCA----GATTCGGCGTGTTCGAAGACCGCCTCGAAATCG 244
BSNT_00803___ 242 TTGTGGCGGATGAAGGAGACAGCTTTGACTTTGATCAAAAGCAGCAGGAT 291
|.||.||.|||.|.||||||||.|||||..||.|..|.||.|||.||||.
BL02207___rsb 245 TCGTCGCCGATCAGGGAGACAGTTTTGATATTCAGGATAAACAGAAGGAG 294
BSNT_00803___ 292 CTAGGGCCGTACACACCTTCGCACACAGTTGATCAATTATCAGAAGGAGG 341
||.||.||.||..|.|||..|||.||.||.||||||||.|||||||||||
BL02207___rsb 295 CTCGGACCATATTCCCCTGAGCATACGGTAGATCAATTGTCAGAAGGAGG 344
BSNT_00803___ 342 GCTCGGTCTATATTTAATGGAAACGCTCATGGATGAAGT-------CAGA 384
|||||||.|||||||||||||.||||||||||||||||| ||||
BL02207___rsb 345 GCTCGGTTTATATTTAATGGAGACGCTCATGGATGAAGTGCATGTCCAGA 394
BSNT_00803___ 385 GTGCAAAACCACTCCGGCGTCACCGTAGCGATGACAAAGTATTTAAATGG 434
.|| ||||.|||||.|||||..||||||||||||..|||||..|
BL02207___rsb 395 TTG-------ACTCAGGCGTAACCGTCTCGATGACAAAGTTCTTAAACAG 437
BSNT_00803___ 435 GGAGCGAGTTGATCATGACACAACCATCAAAAACTACGAAACTAACTAA 483
|||||||||||||.|||.|||||||.||.||||||||||||||||||||
BL02207___rsb 438 GGAGCGAGTTGATGATGGCACAACCGTCCAAAACTACGAAACTAACTAA 486
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