Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03411 and BL02221
See
Amino acid alignment /
Visit
BSNT_03411 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_03411___ypeB.1.5803.seq
# -bsequence dna-align/BL02221___ybeB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03411___ypeB-BL02221___ybeB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03411___ypeB-BL02221___ybeB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03411___ypeB
# 2: BL02221___ybeB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1401
# Identity: 997/1401 (71.2%)
# Similarity: 997/1401 (71.2%)
# Gaps: 96/1401 ( 6.9%)
# Score: 3353.5
#
#
#=======================================
BSNT_03411___ 1 ATGATCAGAGGAATTTTAATCGCCGTGCTTGGTATTGCAATAGTCGGTAC 50
||||||||||||||||||||||||.|..|.|||.|.||.||.|||||.||
BL02221___ybe 1 ATGATCAGAGGAATTTTAATCGCCCTTTTAGGTGTCGCCATCGTCGGAAC 50
BSNT_03411___ 51 AGGCTACTGGGGATACAAAGAACACCAGGAAAAAGACGCAGTTCTTCTTC 100
|.||||.|||||.||.||||||||.|||||.||||||||.|||.|.||||
BL02221___ybe 51 AAGCTATTGGGGCTATAAAGAACATCAGGAGAAAGACGCCGTTTTGCTTC 100
BSNT_03411___ 101 ATGCTGAAAATAACTATCAGCGGGCGTTTCATGAGCTT-ACCTATCAGGT 149
||||.|||||.||||||||..||||.|||||.|| ||| ||.||||||||
BL02221___ybe 101 ATGCCGAAAACAACTATCAAAGGGCATTTCACGA-CTTAACTTATCAGGT 149
BSNT_03411___ 150 GGATCAGCTTCATGATAAAATCGGAACAACACTTGCCATGAACAGCCAAA 199
|||||||||.||||||||||||||.|..||.|||||.|||||||||.|||
BL02221___ybe 150 GGATCAGCTGCATGATAAAATCGGGAGCACGCTTGCGATGAACAGCAAAA 199
BSNT_03411___ 200 AATCACTGTCGCCTGCATTGATCGATGTGTGGAGGATTACATCAGAAGCT 249
||.|.|||||.||.||.|||...||.||.||||..|..||.||.|||||.
BL02221___ybe 200 AAACGCTGTCTCCCGCTTTGGCGGAAGTCTGGAAAACGACTTCTGAAGCG 249
BSNT_03411___ 250 CATAACAGCGTCAGTCAGCTGCCGCTTACATTAATGCCGTTTAATAAAAC 299
|||||||..|||||.|||||||||||.||.||||||||||||||.||.||
BL02221___ybe 250 CATAACAATGTCAGCCAGCTGCCGCTGACCTTAATGCCGTTTAACAAGAC 299
BSNT_03411___ 300 TGAAGAGCTATTATCAAAGATCGGCGATTTCAGCTATAAAACGTCAGTCA 349
.||||||.|.||..|||||.||||.|||||||||||.|||.|..|.||..
BL02221___ybe 300 CGAAGAGTTTTTGGCAAAGGTCGGAGATTTCAGCTACAAAGCAGCCGTGC 349
BSNT_03411___ 350 GAGATTTGGACCAAAAGCCGCTTGATAAAAACGAGTATACATCACTAAAT 399
|.|||.|.|||.||.|||||||..|||||||.|||||..|.||..|||||
BL02221___ybe 350 GCGATCTTGACAAAGAGCCGCTCAATAAAAAAGAGTACGCTTCTTTAAAT 399
BSNT_03411___ 400 AAGCTATATCAGCAGTCCGAAGATATACAAAATGAATTGCGTCATGTTCA 449
.||||||||.|..|.||..|.|||||||||||||||.|||||.||||.||
BL02221___ybe 400 CAGCTATATGAAAATTCAAAGGATATACAAAATGAACTGCGTAATGTCCA 449
BSNT_03411___ 450 GCACCTTG--TCATGAGCAAAAACCTTCGCTGGATGGACGTAGAAATGGC 497
||| .||| |..||| ||||||..|..|.||||||||.||||||.|.||
BL02221___ybe 450 GCA-TTTGATTATTGA-CAAAAATTTGAGATGGATGGATGTAGAACTTGC 497
BSNT_03411___ 498 CCTGGCTTCTGACGAAAAACAAAGTGATAATACGATTATCAACAGCTTTA 547
.||.||.||.|.|.||||||||||.||.||||.||||||.||..||||||
BL02221___ybe 498 GCTCGCGTCCGGCCAAAAACAAAGCGACAATAAGATTATTAATGGCTTTA 547
BSNT_03411___ 548 AAACAGTCGAAAAAAATGTTGGTGCATTCTCCACTGG-CACTGATCTTGG 596
||||.||.|||||||..|...|||||||.|| || .||.|||.|.||
BL02221___ybe 548 AAACCGTTGAAAAAAGCGCAAGTGCATTTTC----GGATACGGATTTAGG 593
BSNT_03411___ 597 C----CCGAGTTTCACCAGTACGAAAAAAGAAGAGAAAGGCTTCAGCCAT 642
| |.||| .|.||.|..|||||||||||..||.||||.|.|..||||
BL02221___ybe 594 CGCGACAGAG-ATGACGAACACGAAAAAAGAGCAGCAAGGGTACGACCAT 642
BSNT_03411___ 643 CT-GAAGGGAAAACAAATTTCCGAACAGGAA----GCAA--------AAC 679
.| .||||.|||| .|||..|||||.|.||| |||| ||
BL02221___ybe 643 TTACAAGGCAAAA-GAATAACCGAAAAAGAAGCGCGCAAGATTGCCCAA- 690
BSNT_03411___ 680 AAATTGCTGAGCGCTTTGCCCCAGATGACAATTATT-CA--ATTAAAGTG 726
||||| || ||||| |||||..||| || ||.|||||.
BL02221___ybe 691 AAATT------CG------CCCAG--GACAAAAATTACAATATCAAAGTA 726
BSNT_03411___ 727 GTAAAGAGCGGAAAAAAAACAAATCGCGATGTATATAGCATCAGCATGAA 776
...||.|||||.||.|||||.||..|.||||||||.||||||||.|||.|
BL02221___ybe 727 TCGAAAAGCGGCAAGAAAACGAACAGGGATGTATACAGCATCAGTATGCA 776
BSNT_03411___ 777 AGACCCAGACCATAAAGCAGTGATTTATATGGATATTA-CGAAGAAGGGC 825
.|||||.||.||.|||||.|..|||||||||||.|||| |||| ||.|||
BL02221___ybe 777 GGACCCTGATCAAAAAGCGGATATTTATATGGACATTACCGAA-AAAGGC 825
BSNT_03411___ 826 GGGCATCCGGTATACTTGATCCAAAACAGGGAAGTGAAAGATCAGAAAAT 875
||..|||||||.||..||||.|||||||...||.|.||||||.|.|||||
BL02221___ybe 826 GGATATCCGGTTTATCTGATTCAAAACAAAAAAATTAAAGATGAAAAAAT 875
BSNT_03411___ 876 CAGTTTAAATGACGGATCGAACCGAGCGCTTGCATTTTTAAAGAAAAACG 925
|||.|||||.||.|..||.|||..|||.|||..||||||.||.|||||||
BL02221___ybe 876 CAGCTTAAACGATGCGTCAAACAAAGCCCTTCAATTTTTGAAAAAAAACG 925
BSNT_03411___ 926 GATTTGAAACAGATGATTTGCAAATTGATGAAAGTGCCCAATATGATAAA 975
|.|.|.||||.||.||..||.|.||.||||||||..|.|||||.||....
BL02221___ybe 926 GCTATAAAACGGAAGACCTGAAGATGGATGAAAGCTCGCAATACGACGGC 975
BSNT_03411___ 976 ATCGGTGTATTTTCATATGTTCCTGTTGAAAATAAAGTCCGGATGTACCC 1025
.||||.||.|||||||.||||||.||..|..|..|.|||.||.|.||.||
BL02221___ybe 976 GTCGGGGTGTTTTCATTTGTTCCGGTCCAGGACGATGTCTGGCTCTATCC 1025
BSNT_03411___ 1026 GGAGGCA--ATTCGTATGAAAGTGGC-CTTGGATGACGGTGAGGTTGTCG 1072
||| || ||.||.||.||.||.|| ||| ||.|||||.|||.||..||
BL02221___ybe 1026 GGA--CAGCATCCGCATCAAGGTCGCGCTT-GACGACGGCGAGATTACCG 1072
BSNT_03411___ 1073 GCTTTTCAGCAAGAGACTTCCTCACATCTCACAGAAAAA----------- 1111
|.|||...||||..||.|||.| .|||||.||.|||||
BL02221___ybe 1073 GGTTTAATGCAAAGGATTTCTT--AATCTCCCATAAAAAAAGAGACTTGC 1120
BSNT_03411___ 1112 -GAA--CCATACCTAA-GCCTGCAATTACTGAAGCAGAGGCAAAGTCTAA 1157
||| ||| |.|||| |||||.|| ||||..|.|| |||.|
BL02221___ybe 1121 CGAAGCCCA-AACTAACGCCTGAAA------AAGCGAAAGC-AAGCC--- 1159
BSNT_03411___ 1158 ATTAAATAAAAATGTACAAG-TGAGAGAAACAAGGCTCGCTTTGATTACA 1206
|.|||...||.|||.||| |.|| ||.||..|.||.|||||..|.||
BL02221___ybe 1160 --TGAATCCCAACGTAAAAGTTCAG-GAGACGCGCCTTGCTTTAGTCAC- 1205
BSNT_03411___ 1207 AATGAACTAGGT----CAAGAAGTGTTATGTTACGAAATGCTTGGAACAA 1252
||||.||.| |||||||||.|.||.||||||||.||.||.||.|
BL02221___ybe 1206 ---GAACGAGCTTTCGCAAGAAGTGCTCTGCTACGAAATTCTCGGCACGA 1252
BSNT_03411___ 1253 TTGAAAATGACACATTCAGAATGTATATCAATGCCAAAGACGGATCGGAA 1302
|||||||.||.||||||.|.||||..|||||||||||.|||||..|||||
BL02221___ybe 1253 TTGAAAACGATACATTCCGCATGTTCATCAATGCCAATGACGGCACGGAA 1302
BSNT_03411___ 1303 GAAAAGGTTGAAAAACTAAAAAATGCAGAACCTATATATAAAGACCTATA 1352
||.||||||.|.|||.|.||||..||||||||.|||||.||.|||.|.||
BL02221___ybe 1303 GAGAAGGTTCAGAAAATGAAAAGCGCAGAACCGATATACAACGACTTGTA 1352
BSNT_03411___ 1353 A 1353
|
BL02221___ybe 1353 A 1353
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.