Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02515 and BL02243

See Amino acid alignment / Visit BSNT_02515 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence dna-align/BSNT_02515___murG.1.5803.seq
#    -bsequence dna-align/BL02243___murG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02515___murG-BL02243___murG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02515___murG-BL02243___murG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02515___murG
# 2: BL02243___murG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1135
# Identity:     818/1135 (72.1%)
# Similarity:   818/1135 (72.1%)
# Gaps:          77/1135 ( 6.8%)
# Score: 2854.5
# 
#
#=======================================

BSNT_02515___      1 ATGCGAATTGCAATAAGCGGAGGCGGTACAGGGGGACATATTTATCCTGC     50
                     |||||.||||...|.|||||||||||.||.||.||.||||||||.||.||
BL02243___mur      1 ATGCGGATTGTTGTTAGCGGAGGCGGAACGGGCGGCCATATTTACCCCGC     50

BSNT_02515___     51 GCTTGCTTTTATTAAAGAAGTGCAAAGACGTCATC-CTA--ATGTGGAAT     97
                     .|||||.|||||||||||||||   |.|||.|||| |.|  ||||.||.|
BL02243___mur     51 CCTTGCGTTTATTAAAGAAGTG---AAACGGCATCACGAAGATGTTGAGT     97

BSNT_02515___     98 TTTTATATATTGGAACAGAAAACGGGCTGGAGAAAAAAATTGTTGAGCGG    147
                     ||||||||||.|||||.|||||.||.|||||||||||.||.||.||||||
BL02243___mur     98 TTTTATATATCGGAACCGAAAAAGGCCTGGAGAAAAATATCGTCGAGCGG    147

BSNT_02515___    148 GA--GAATATACCGTTTC---GTTCAATTGAAATTACAGGATTTAAAAGA    192
                     ||  |.||   ||.||||   |  |.|||||||||||.||.|||||||||
BL02243___mur    148 GAAGGGAT---CCCTTTCAAAG--CGATTGAAATTACGGGTTTTAAAAGA    192

BSNT_02515___    193 AAATTGTCATTTGAAAATGTCAAGACTGTGATGCGTTTTCTGAAGGGCGT    242
                     |||.|.|||||||||||.|||||.||.||.|||||.|||.|.|||||.||
BL02243___mur    193 AAACTTTCATTTGAAAACGTCAAAACCGTCATGCGCTTTTTAAAGGGTGT    242

BSNT_02515___    243 CAAA----------AAGAGTAAATCGTATTTAGCGGAATTTAAGCCCGAT    282
                     .|||          ||||.|.||        |.|||  ||.|||||.|||
BL02243___mur    243 AAAAGAATGCAAAGAAGAATTAA--------AACGG--TTCAAGCCGGAT    282

BSNT_02515___    283 GCCGTAATTGGAACGGGCGGTTATGTATGCGGGCCGGTTGTCTATGCCGC    332
                     |||||.||.||.||||||||.||.||.|||||.||.||.||.||.|||||
BL02243___mur    283 GCCGTGATCGGCACGGGCGGCTACGTGTGCGGCCCCGTCGTATACGCCGC    332

BSNT_02515___    333 TGCGAAAATGGGAATTCCGACTATTGTCCATGAACAAAACAGCCTGCCGG    382
                     |.|.|||.||||.||||||||.|||.||||.||||||||||||||.||.|
BL02243___mur    333 TTCAAAACTGGGGATTCCGACGATTATCCACGAACAAAACAGCCTTCCCG    382

BSNT_02515___    383 GCATCACGAATAAGTTTCTTTCAAAATATGTTAATAAAGTAGCGATTTGT    432
                     |..||||.|||||||||.|.||.|||||||||.||||.||||||||||||
BL02243___mur    383 GACTCACCAATAAGTTTTTATCCAAATATGTTGATAAGGTAGCGATTTGT    432

BSNT_02515___    433 TTTGAAGAAGCGAAATCACATTTTCCTAGC-GAGAAAGTTGTATTTACGG    481
                     |||||.|||||||||.||||||||||| || ||.||||||||.|||||.|
BL02243___mur    433 TTTGATGAAGCGAAAACACATTTTCCT-GCAGAAAAAGTTGTTTTTACAG    481

BSNT_02515___    482 GAAACCCGCGAGCCTCTGAAGTCGTCTCAATAAAGACGGGACGATCAATG    531
                     ||||||||.|.||.||||||||||||||.|||||...|||.||.||..||
BL02243___mur    482 GAAACCCGAGGGCGTCTGAAGTCGTCTCTATAAAAGGGGGCCGTTCCCTG    531

BSNT_02515___    532 GCTGAATTTGGG-CTTTCTGAAGAGAAAAAAACGGTCTTAATTTTCGGCG    580
                     .|.| .|||||| |||.|.||.|..||||||||||||.|.||||||||.|
BL02243___mur    532 ACCG-CTTTGGGTCTTGCAGAGGGCAAAAAAACGGTCCTTATTTTCGGAG    580

BSNT_02515___    581 GAAGCCGAGGCGCTGCACCGATTAACCGCGCTGTCATTGACATGCA----    626
                     |.|||||.||.||.||.|||||.||....||.|||||||..|||||    
BL02243___mur    581 GCAGCCGCGGTGCCGCTCCGATCAATGAAGCGGTCATTGCGATGCAAAAC    630

BSNT_02515___    627 GGATGCGCTGAAAACAAGAGACTATCAAGTGCTGTATATCACCGGTGAAG    676
                     |.||    |.||||...|.||.||.||.||.||.|||.||||.||.||||
BL02243___mur    631 GAAT----TAAAAAAGCGGGATTACCAGGTTCTTTATGTCACAGGGGAAG    676

BSNT_02515___    677 TTCACTATGAAAAAGTAATGAATGAGC-TGAAAAGCAAGGGTGCCGCTGA    725
                     ||||||||||.|||||.|....||.|| ||||||..|| ||.||||||..
BL02243___mur    677 TTCACTATGATAAAGTCACAGCTGCGCTTGAAAAAGAA-GGCGCCGCTCC    725

BSNT_02515___    726 TAATATGGTCACAAAGCCGTTTCTTCATCAAATGCCTGAGTATTTAAAGG    775
                     .|||||||||....||||||||||.|||||||||||.|||||.|||||.|
BL02243___mur    726 GAATATGGTCGTCCAGCCGTTTCTCCATCAAATGCCCGAGTACTTAAAAG    775

BSNT_02515___    776 CCATTGATGTCATTGTGGCCAGAGCCGGTGCGACAACGATTGCCGAAATT    825
                     |..|.||||||.|.||||.|.|.||.||.||.||.||.||.||.|||||.
BL02243___mur    776 CGTTCGATGTCGTCGTGGGCCGCGCAGGGGCAACGACAATAGCGGAAATC    825

BSNT_02515___    826 ACTGCTCTCGGAATCCCAAGTGTTCTGATCCCGAGTCCATATGTGACAGC    875
                     ||.||.|||||.||.|||||.||||||||.||||||||.|||||.||.||
BL02243___mur    826 ACCGCGCTCGGCATTCCAAGCGTTCTGATTCCGAGTCCGTATGTTACGGC    875

BSNT_02515___    876 GAATCACCAGGAGGTCAATGCGAGATCTCTCGGCCAGCATGATGCGGCGA    925
                     .||.||||||||.||.||.||..|.||.|||||..||||..|.||.||..
BL02243___mur    876 CAACCACCAGGAAGTAAACGCACGCTCACTCGGGGAGCAGAACGCCGCTG    925

BSNT_02515___    926 TTGTACTGAAAGAAACAGAGCTCAGCGGGGAGA-AGC-TGATTGAAGCGC    973
                     |.||..|.||||||.|||||||.|  ..||||| .|| |.|||.|.|||.
BL02243___mur    926 TCGTTTTAAAAGAATCAGAGCTTA--ATGGAGACCGCTTAATTCAGGCGA    973

BSNT_02515___    974 TAGACCGAATTGTACTGAATGAGCAAACGTTAAAGGAAATGA------GC   1017
                     |.||.|..|||.|||...|.||..|.|||||..|.||.||||      ||
BL02243___mur    974 TCGATCATATTTTACAAGACGAAAAGACGTTGGAAGAGATGAAGATCCGC   1023

BSNT_02515___   1018 GAACGAACAAAGTCACTCGGTGTTCCTGACGCGGCTGCCCGTTTATACAG   1067
                     |      |.||.||.||.||.||.||.|||||.||.|..||.||.||||.
BL02243___mur   1024 G------CGAAATCGCTTGGCGTGCCGGACGCTGCGGAACGCTTGTACAA   1067

BSNT_02515___   1068 CGTACTCGAGGAATTAAA---------AAAATAG-   1092
                     .||.||..|.|||||.||         ||||| | 
BL02243___mur   1068 TGTGCTGAAAGAATTGAAACATCATGCAAAAT-GA   1101


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