Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02531 and BL02255

See Amino acid alignment / Visit BSNT_02531 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence dna-align/BSNT_02531___sigE.1.5803.seq
#    -bsequence dna-align/BL02255___sigE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02531___sigE-BL02255___sigE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02531___sigE-BL02255___sigE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02531___sigE
# 2: BL02255___sigE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 721
# Identity:     581/721 (80.6%)
# Similarity:   581/721 (80.6%)
# Gaps:           2/721 ( 0.3%)
# Score: 2333.0
# 
#
#=======================================

BSNT_02531___      1 ATGAAAAAACTGAAATTACGGTTGACGCACCTCTGGTATAAGCTGCTGAT     50
                     |||||||||||.||||||.||||.||..|.||.|||||.||.||..|.||
BL02255___sig      1 ATGAAAAAACTAAAATTAAGGTTAACCTATCTATGGTACAAACTTTTAAT     50

BSNT_02531___     51 GAAACTTGGGCTGAAAAGTGATGAAGTCTATTACATAGGCGGGAGTGAAG    100
                     ||||||.|||||||||||.||.|||.|.|||||.||.|||||.||.||.|
BL02255___sig     51 GAAACTGGGGCTGAAAAGCGACGAAATTTATTATATCGGCGGAAGCGAGG    100

BSNT_02531___    101 CCCTGCCGCCTCCATTATCTAAAGATGAGGAGCAGGT-TTTGTTAATGAA    149
                     |.||.||.||.|||||.||.||||||||.|||||||| .||.|..|| ||
BL02255___sig    101 CGCTTCCCCCGCCATTGTCAAAAGATGAAGAGCAGGTGCTTCTCCAT-AA    149

BSNT_02531___    150 GCTCCCAAACGGCGATCAGGCGGCGCGCGCCATTCTAATTGAACGCAATT    199
                     |||.||..||||.|||||||||||.||.||.|||.|.||||||||.|||.
BL02255___sig    150 GCTGCCTGACGGTGATCAGGCGGCACGAGCGATTTTGATTGAACGAAATC    199

BSNT_02531___    200 TGCGTCTGGTCGTATATATCGCCCGTAAATTTGAAAATACGGGAATTAAT    249
                     |..|.||||||||.||.|||||..|.||||||||||||||.|||||.|||
BL02255___sig    200 TCAGACTGGTCGTGTACATCGCGAGAAAATTTGAAAATACAGGAATCAAT    249

BSNT_02531___    250 ATAGAGGATTTAATCAGCATCGGTACCATCGGACTAATCAAAGCTGTGAA    299
                     ||.||||||||||||..||||||.||.|||||.||.||||||||.|||||
BL02255___sig    250 ATCGAGGATTTAATCTCCATCGGCACGATCGGGCTCATCAAAGCGGTGAA    299

BSNT_02531___    300 TACATTCAATCCAGAAAAGAAAATCAAGCTTGCTACCTATGCCTCCCGGT    349
                     |||.||.|||||.||.||.||||||||.||.|||||.|||||.|||.|.|
BL02255___sig    300 TACGTTTAATCCCGAGAAAAAAATCAAACTGGCTACATATGCTTCCAGAT    349

BSNT_02531___    350 GTATAGAAAATGAAATCCTGATGTATTTAAGAAGAAATAACAAAATCCGT    399
                     |.||.|||||||||||..|||||||||||||||||||.||.|||||||||
BL02255___sig    350 GCATTGAAAATGAAATTTTGATGTATTTAAGAAGAAACAATAAAATCCGT    399

BSNT_02531___    400 TCAGAGGTTTCCTTTGATGAACCGCTTAATATTGATTGGGACGGCAATGA    449
                     ||||||||.||.||.||.||||||||.||.||.|||||||||||.|||||
BL02255___sig    400 TCAGAGGTATCATTCGACGAACCGCTGAACATCGATTGGGACGGAAATGA    449

BSNT_02531___    450 GCTTTTGCTTTCTGATGTGCTCGGCACTGACGATGACATCATCACTAAAG    499
                     |||..|.||.||.|||||||||||.||.||..|.|||||.||.||.||||
BL02255___sig    450 GCTGCTTCTCTCAGATGTGCTCGGAACAGAAAACGACATTATTACAAAAG    499

BSNT_02531___    500 ACATAGAAGCTAACGTCGATAAAAAGCTTTTGAAAAAAGCGCTTGAACAG    549
                     ||||.|||||.|||||.||.||.|||||..||||||||||||||||||||
BL02255___sig    500 ACATCGAAGCAAACGTTGACAAGAAGCTGCTGAAAAAAGCGCTTGAACAG    549

BSNT_02531___    550 CTTAATGAGAGAGAAAAGCAAATCATGGAGCTGCGGTTTGGGCTTGTCGG    599
                     ||.|||||.||||||||.||.|||||||||||.||.||.|||||||||||
BL02255___sig    550 CTCAATGACAGAGAAAAACAGATCATGGAGCTCCGTTTCGGGCTTGTCGG    599

BSNT_02531___    600 TGAAGAAGAAAAAACCCAAAAGGATGTAGCGGATATGATGGGGATTTCTC    649
                     .|..|||||||||||.|||||.||.||.||.||||||.|.|||||.||.|
BL02255___sig    600 AGGGGAAGAAAAAACACAAAAAGACGTTGCCGATATGCTCGGGATCTCCC    649

BSNT_02531___    650 AGTCTTATATTTCGCGGCTTGAGAAAAGAATTATAAAAAGATTGAGAAAA    699
                     ||||.||||||||.||.|||||.|||||||||||.|||||..|..|||||
BL02255___sig    650 AGTCATATATTTCCCGACTTGAAAAAAGAATTATTAAAAGGCTCCGAAAA    699

BSNT_02531___    700 GAGTTCAACAAAATGGTGTAA    720
                     ||.||||||||.|||||.|||
BL02255___sig    700 GAATTCAACAAGATGGTTTAA    720


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