Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02549 and BL02268
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02549.1.5803.seq
# -bsequence dna-align/BL02268___ylyA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02549-BL02268___ylyA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02549-BL02268___ylyA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02549
# 2: BL02268___ylyA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 391
# Identity: 268/391 (68.5%)
# Similarity: 268/391 (68.5%)
# Gaps: 41/391 (10.5%)
# Score: 858.5
#
#
#=======================================
BSNT_02549 1 ATGAATGATCAACTGACCGCAATTTATACGGAACTTCTTCTGATGAAAGA 50
.||||.||.||.|||.|.||||||.||||.||||||||||..|||||.||
BL02268___yly 1 GTGAACGAGCAGCTGGCGGCAATTCATACCGAACTTCTTCAAATGAAGGA 50
BSNT_02549 51 AGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTT---CAGGTTTCTA 97
|||.||..|..|.||..|.|||||.||.||.|..||| ||||.||||
BL02268___yly 51 AGAGTTGGAAGCAAGGCTTTTTGAATACTCCTTTTTTCAGCAGGATTCT- 99
BSNT_02549 98 CAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTAT 147
||.| |||.||.| ||.| |.||..|.|||||.||.||.|||
BL02268___yly 100 CAGG-------GCATCAGT---TCGT-ATCAGCAGGCAACACTTATGTAT 138
BSNT_02549 148 CATATTAAAGAAGAGCTTCAAGACGTTCTCCTTGCATTGTCCAAAATCGA 197
|||.|.||||||||||||||.|||||.||..|.||..|.||.||||||||
BL02268___yly 139 CATGTAAAAGAAGAGCTTCAGGACGTGCTTTTGGCCCTTTCAAAAATCGA 188
BSNT_02549 198 AAACGGCACATTCGG-ATACTGTGAAGAAAC----CGGGGCTCCCATTCC 242
||||||.||||.||| || .||.|||||||| |.|| |.|||||
BL02268___yly 189 AAACGGAACATACGGCAT-TTGCGAAGAAACAAATCAGG----CTATTCC 233
BSNT_02549 243 TCTTGCAAAGCTGGCAGTGCTGCCGACTGCCCGAACAGCAAACGATTTTC 292
.||.||||||.||.|..|.||||||||.||.||.||.||.|||||||||.
BL02268___yly 234 GCTGGCAAAGATGACTATTCTGCCGACGGCGCGCACTGCGAACGATTTTT 283
BSNT_02549 293 TTTATTCTGTCCAATTTGAAAAAAAAACGCTTCCGATATG----GAAATC 338
|.|||..||.|||||||||||||||.||||||||.||.|| ||
BL02268___yly 284 TATATCATGCCCAATTTGAAAAAAAGACGCTTCCTATTTGGGCTGA---- 329
BSNT_02549 339 AACGGATATCGAATATGGTCA----GGCACTGTATGAATAA 375
.|||||| ||| |.|.||| |||.||.||...||||
BL02268___yly 330 GACGGAT---GAA-ACGTTCAACCGGGCGCTCTACTCATAA 366
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