Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02555 and BL02273
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_02555___pyrB.1.5803.seq
# -bsequence dna-align/BL02273___pyrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02555___pyrB-BL02273___pyrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02555___pyrB-BL02273___pyrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02555___pyrB
# 2: BL02273___pyrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 964
# Identity: 649/964 (67.3%)
# Similarity: 649/964 (67.3%)
# Gaps: 92/964 ( 9.5%)
# Score: 2079.0
#
#
#=======================================
BSNT_02555___ 1 ATGAAGCATTTAACGACGATGAGTGAACTCAGCACTGAGGAAATCAAAGA 50
|||||.||.||.||..|.||||.|||.||.||...||||||.||..|.||
BL02273___pyr 1 ATGAAACACTTGACCGCAATGAATGAGCTTAGTCTTGAGGATATTCACGA 50
BSNT_02555___ 51 TTTGCTTCAAAAAGCACAAGATCTCAAAAGCGGAAAAACAGACAA----- 95
..||.||.||.|.||...|| |||.|||||| ||.|||
BL02273___pyr 51 GCTGATTGAAGAGGCGAGAG--------AGCTGAAAAA-AGGCAAGTCCG 91
BSNT_02555___ 96 --TCAG--CTTACAGGAAAGTTTGCCGCAAACCTGTTTTTCGAACCGAGC 141
||.| ||..|.||||||||.||.||.|||||||||||.|||||||||
BL02273___pyr 92 ATTCCGTTCTCTCCGGAAAGTTCGCTGCCAACCTGTTTTTTGAACCGAGC 141
BSNT_02555___ 142 ACGAGAACGCGGTTCAGCTTTGAGGTCGCAGAAAAAAAGCTGGGCATGAA 191
||.||||||||.||||||||.||.||.||.|||||.||.||.||||||||
BL02273___pyr 142 ACAAGAACGCGCTTCAGCTTCGAAGTGGCTGAAAAGAAACTCGGCATGAA 191
BSNT_02555___ 192 TGTGCTCAACCTTGA---TGGAACAAGCACAAGCGTGCAAAAAGGCGAAA 238
||||.|.|||||.|| ||...|| ||.|||||.||||||||.|||.
BL02273___pyr 192 TGTGTTGAACCTGGACGGTGTTTCA---ACGAGCGTACAAAAAGGAGAAT 238
BSNT_02555___ 239 CCTTATATGACACGATCCGGACGCTCGAATCAATCGGTGTGGACGTCTGC 288
|.||.||.||.||..||..|||.||||||||.|||||.|..||.||.||.
BL02273___pyr 239 CGTTGTACGATACCGTCAAGACCCTCGAATCCATCGGCGCTGATGTATGT 288
BSNT_02555___ 289 GTCATCAGGCACAGTGAGGATGAGTATTATGAAGAGCTTGTCAGCCAGGT 338
||.|||||.|||..|.|.|||.|.|||||.||.||.||..||.|.||.||
BL02273___pyr 289 GTGATCAGACACTCTCATGATCATTATTACGATGAACTCATCGGACATGT 338
BSNT_02555___ 339 GAATATTCCGATTCTGAATGCGGGAGACGGATGCGGCCAGCATCCAACAC 388
....||||||.|..|.|||||.||||||||.|||||.||||||||.||.|
BL02273___pyr 339 CGGCATTCCGGTGATCAATGCCGGAGACGGCTGCGGTCAGCATCCCACTC 388
BSNT_02555___ 389 AATCACTGCTTGATTTAATGACGATTTATGAAGAGTTCAATACGTTCAAA 438
|.||..||||.|||||.|||||||||.|.||.||.| .|..||.|
BL02273___pyr 389 AGTCTTTGCTCGATTTGATGACGATTCACGAGGAAT------GGGGCAGA 432
BSNT_02555___ 439 ------GGGCTTACTGTCTCCATTCACGGCGACATCAAGCATAGCAGAGT 482
||.||.||.||.|||||.|||||.||.||||||||.||||||||
BL02273___pyr 433 TTTGCCGGACTGACGGTATCCATACACGGAGATATCAAGCACAGCAGAGT 482
BSNT_02555___ 483 GGCAAGGTCAAATGCGGAAGTGTTGACAAGATTGGGTGCCCGGGTCCTAT 532
|||||||||.|||||.||||||.||||||||.|.||.||...|||.||.|
BL02273___pyr 483 GGCAAGGTCCAATGCCGAAGTGCTGACAAGACTCGGAGCAAAGGTTCTTT 532
BSNT_02555___ 533 TTTCCGGCCCTTCGGAATGGCAGGATGAAGAAAATACATTCGGTACGTAT 582
|.||.||.||....|||||||.|||||||||.|||.|||.|||.||.|||
BL02273___pyr 533 TCTCAGGTCCAGACGAATGGCGGGATGAAGACAATCCATACGGGACATAT 582
BSNT_02555___ 583 GTCTCAATGGATGAAGCAGTTGAGTCTTCCGATGTCGTCATGCTGCTGCG 632
||.||....||.|||||.||||....|||.||||||||.|||||.||.||
BL02273___pyr 583 GTGTCGCCTGACGAAGCGGTTGCACATTCGGATGTCGTGATGCTTCTCCG 632
BSNT_02555___ 633 CATTCAAAATGAACGACAT----CAATCCGCTGTCAGCCAG--GAAGGCT 676
.|||||..|.|||||.||| .|| ||.|.| |||.||.
BL02273___pyr 633 GATTCAGCACGAACGGCATGAGAAAA---------AGGCGGCAGAACGCG 673
BSNT_02555___ 677 ATT-----TAAACAAATACGGCTTGACCGTAGAACGGGCTGAGC----GT 717
||| .|||| ||.|||.|||.|..|..|.|||||.|||| |.
BL02273___pyr 674 ATTATCTCGAAAC--ATTCGGATTGTCGCTCAAGCGGGCGGAGCTCTTGA 721
BSNT_02555___ 718 ATGAAGCGGCATGCGATCATCATGCATCCTGCTCCGGTAAACAGAGGGGT 767
|..||| |.|||.||||||||||.||.||.||.||.|||.||||.||
BL02273___pyr 722 AAAAAG----ACGCGGTCATCATGCACCCCGCACCTGTCAACCGAGGCGT 767
BSNT_02555___ 768 GGAGATTGATGACAGCT----TAGTAGAAAGCGAAAAATCAAGAATCTTC 813
.||||| |||||| | |.||.|||..||.....||.||.||.||.
BL02273___pyr 768 CGAGAT---TGACAG-TGCACTGGTCGAATCCGGCCGGTCGAGGATTTTT 813
BSNT_02555___ 814 AAGCAAATGCAAAATGGCGTATTTATCAGAATGGCAGTGATACAGCGTGC 863
||.||||||.||||.||.||||.||||||||||||.||..||.|..|.||
BL02273___pyr 814 AAACAAATGGAAAACGGAGTATATATCAGAATGGCGGTTTTAAAAAGAGC 863
BSNT_02555___ 864 -CTT----AC-----AAACCAATGTGAAAAGAGGAGA--AGCAGCGTATG 901
||| || ||||.|| |||||.||||| || ||.||||
BL02273___pyr 864 GCTTCTAAACGGCGAAAACAAA----AAAAGGGGAGATCAG--GCTTATG 907
BSNT_02555___ 902 TCATATCTCATTAA 915
||.|||.|.|||||
BL02273___pyr 908 TCTTATTTAATTAA 921
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