Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02557 and BL02274

See Amino acid alignment / Visit BSNT_02557 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence dna-align/BSNT_02557___pyrC.1.5803.seq
#    -bsequence dna-align/BL02274___pyrC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02557___pyrC-BL02274___pyrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02557___pyrC-BL02274___pyrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02557___pyrC
# 2: BL02274___pyrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1315
# Identity:     982/1315 (74.7%)
# Similarity:   982/1315 (74.7%)
# Gaps:          56/1315 ( 4.3%)
# Score: 3508.0
# 
#
#=======================================

BSNT_02557___      1 ATGTCATATCTCATTAAAAACGGCTGGATACTAAACGAAAATGGTGAAAA     50
                     |||||.|||.|.|||||||||||||..||.||..|||||||.||.|||||
BL02274___pyr      1 ATGTCTTATTTAATTAAAAACGGCTTCATGCTCGACGAAAAAGGCGAAAA     50

BSNT_02557___     51 A--ACAGAAGCG-GATATCCGAG-TGACTGGAGAAACCATCACCGCAATC     96
                     |  ||   |||| ||||||.|.| ||| .||.||..|.||||.||..|||
BL02274___pyr     51 AGTAC---AGCGCGATATCAGGGTTGA-AGGCGATGCAATCAGCGAGATC     96

BSNT_02557___     97 GGCAAG-CTTGATGCAAC-----GGATAATGAAACGGTAATTGATGCAAA    140
                     || ||| |||||.||..|     ||     ||||||||.||.|||||..|
BL02274___pyr     97 GG-AAGCCTTGAGGCCGCTTCGGGG-----GAAACGGTCATCGATGCGGA    140

BSNT_02557___    141 AGG--TTTGCTCGTTTCACCTGGGTTTGTTGATCTCCACGTGCATTTCAG    188
                     .||  |||  ||||.||.||.|||.|||||||.||.|||||.||.|||||
BL02274___pyr    141 TGGACTTT--TCGTCTCGCCAGGGCTTGTTGACCTTCACGTTCACTTCAG    188

BSNT_02557___    189 AGAGCCGGGCGGAGAGAAAAAAGAAACTATTGAAACCGGGGCCAAAGCGG    238
                     ||||||||||||.|||||.||||||||.||.|||||.||.||.|||||.|
BL02274___pyr    189 AGAGCCGGGCGGCGAGAAGAAAGAAACGATCGAAACAGGTGCAAAAGCCG    238

BSNT_02557___    239 CGGCACGCGGCGGCTATACTACAGTAGCAGCAATGCCGAATACGCGGCCG    288
                     |.||..|.|||||.|.|||.||.||.||.||||||||||||||.|||||.
BL02274___pyr    239 CAGCGAGAGGCGGGTTTACAACTGTCGCCGCAATGCCGAATACCCGGCCT    288

BSNT_02557___    289 GTTCCTGATACAAAGGAGCAGATGGAATGGGTGCAAAACAGAATTAAAGA    338
                     ||.||.|||||.||.|||||||||||.|||.|....|||.|.|||.|.||
BL02274___pyr    289 GTCCCCGATACGAAAGAGCAGATGGAGTGGCTTGTCAACCGCATTGACGA    338

BSNT_02557___    339 AACATCATGCGTCAGAGTTCTTCCATATGCATCCATTACGATCAGACAAA    388
                     |||..|||..||.|||||.||.||.|||||.||.||.||.|||||.||||
BL02274___pyr    339 AACGGCATCAGTGAGAGTGCTGCCGTATGCTTCAATCACCATCAGGCAAA    388

BSNT_02557___    389 ----TCGGCGATGAAATGACAAACTTTGAAGCGTTAAAAGAAGCCGGGGC    434
                         ||||    ||||||||..|.||.||||.|.|.|||||.|||||.||
BL02274___pyr    389 CAGGTCGG----GAAATGACCGATTTCGAAGGGCTGAAAGACGCCGGCGC    434

BSNT_02557___    435 ATTTGCTTTTACAGATGACGGCGTTGGTATACAGACAGCAGGCATGATGT    484
                     .||.||.|||||.|||||||||||.||..|.||.||.||.||.|||||||
BL02274___pyr    435 GTTCGCGTTTACCGATGACGGCGTCGGCGTTCAAACGGCGGGGATGATGT    484

BSNT_02557___    485 ATGAAGCGATGAAACGGGCAGCCGCAATTGACAAGGCGATTGTTGCACAT    534
                     ||||||||||||||...||.||..|.|||.|.||.|||||.||.||.||.
BL02274___pyr    485 ATGAAGCGATGAAAAAAGCGGCTTCGATTAATAAAGCGATCGTCGCTCAC    534

BSNT_02557___    535 TGCGAGGACAACTCCTTAATTTACGGAGGAAGCGTACATGA-GGGGACAT    583
                     ||.||.|||||.||..|.||.|||||.||.||.|||||.|| ||||| ||
BL02274___pyr    535 TGTGAAGACAATTCACTGATCTACGGCGGCAGTGTACACGATGGGGA-AT    583

BSNT_02557___    584 TCTCCAAAGCGAACGGGCTAAACGGCATACCTTCTGTGTGTGAATCGGTT    633
                     |..|||||||.|||||..|||||||.||.|||||.|||||.|||.|||||
BL02274___pyr    584 TTGCCAAAGCCAACGGTTTAAACGGGATTCCTTCGGTGTGCGAAGCGGTT    633

BSNT_02557___    634 CATATTGCCCGCGATGTGCTGCTGGCTGAGGCGGCAAACTGCCATTACCA    683
                     ||.||.||..|.||||||||.||.||.||.||||||..||||||||||||
BL02274___pyr    634 CACATCGCAAGGGATGTGCTTCTTGCCGAAGCGGCAGGCTGCCATTACCA    683

BSNT_02557___    684 TGTATGCCATATCAGTACAAAAGAATCTGTCAGGGTCGTACGCGATGCGA    733
                     .||.||.||||||||.||.||.|||||.|||||||||||.|||||.||.|
BL02274___pyr    684 CGTCTGTCATATCAGCACGAAGGAATCGGTCAGGGTCGTCCGCGACGCCA    733

BSNT_02557___    734 AAAAAGCGGGAATCAGAGTGACAGCAGAAGTGTCGCCGCATCATTTGCTG    783
                     ||||||||||||||.|.|||||.||.||||||.|||||||.|||.||||.
BL02274___pyr    734 AAAAAGCGGGAATCCGCGTGACGGCGGAAGTGACGCCGCACCATCTGCTC    783

BSNT_02557___    784 CTTTGTGATGAG-GACATCCCGGGGCTGGACACAAACTATAAAATGAATC    832
                     ||||..|| .|| |||||.||.||.||.||.||.||.|||||||||||||
BL02274___pyr    784 CTTTCAGA-CAGCGACATTCCCGGCCTTGATACGAATTATAAAATGAATC    832

BSNT_02557___    833 CTCCGCTCCGCAGCGCAGAAGACAGAGCTGCTTTAATTGAAGGTCTTTTA    882
                     |.|||||..|.||..|.||||||||.|..||..|..||||.||.|||..|
BL02274___pyr    833 CGCCGCTTAGAAGTCCGGAAGACAGGGAAGCGCTCCTTGAGGGGCTTAGA    882

BSNT_02557___    883 GACGGAACAATTGATTTTATTGCAACAGACCATGCACCGCATACGGAAGA    932
                     ||||||||||||||||||||.|||||.||.|||||.||||||||.|||||
BL02274___pyr    883 GACGGAACAATTGATTTTATCGCAACGGATCATGCCCCGCATACAGAAGA    932

BSNT_02557___    933 AGAGAAAAAC-ACAGA-AATGAAACTGGCGCCATTCGGAATTGTCGGCTT    980
                       |||||||| ||||| |||||..||.|||||.||.||||||||||||||
BL02274___pyr    933 --AGAAAAACAACAGACAATGAGCCTTGCGCCTTTTGGAATTGTCGGCTT    980

BSNT_02557___    981 AGAAACAGCATTCCCGCTTCTTTACACACACTTTGTCAAAAATGGCAGCT   1030
                     .||.||.||.||.|||||.||||||||.|||||||||||||..||||..|
BL02274___pyr    981 GGAGACGGCTTTTCCGCTCCTTTACACGCACTTTGTCAAAACAGGCAAAT   1030

BSNT_02557___   1031 GGTCGCTGAAGCAGCTGATTGACTACATGACAATCAAGCCATGCGAAGCG   1080
                     ||.|||||||.||||||...||.||.|||||..||||.||.|||||.|||
BL02274___pyr   1031 GGACGCTGAAACAGCTGCACGATTATATGACGGTCAAACCTTGCGAGGCG   1080

BSNT_02557___   1081 TTCGGTCTCCCATA-TGGAACATTACAAACGGGGCAAGCTGCGGACATTA   1129
                     |||||.||.||.|| .||||..|| .||.|.||.|...|.|||||.||||
BL02274___pyr   1081 TTCGGGCTGCCGTACGGGAAGCTT-GAAGCCGGACGGTCCGCGGATATTA   1129

BSNT_02557___   1130 CGTTAATCGATTTAGAAAAAGAAGCAGTTATAGACAAAGAG-ACATTTTT   1178
                     ||.|.||.|||.|.|||...||||.|...||.||.||| || ||.|||.|
BL02274___pyr   1130 CGCTCATTGATCTTGAACGCGAAGAAAAAATTGATAAA-AGCACCTTTCT   1178

BSNT_02557___   1179 ATCAAAAGGAAAAAATACACCATTCAACGGCATCAGCTGCACCGGCTGGC   1228
                     .||.|||||.|||||.||.||.||..||||||||||||||..||||||||
BL02274___pyr   1179 TTCTAAAGGGAAAAACACGCCGTTTGACGGCATCAGCTGCTTCGGCTGGC   1228

BSNT_02557___   1229 CGGTCGCT---ACAATTGCGGCA---GGGAAGCTTGCTTATGAAGAGGGG   1272
                     ||   |||   |||||   ||||   ||.||.||.|.|||..||||||||
BL02274___pyr   1229 CG---GCTATGACAAT---GGCAAAGGGAAAACTCGTTTACCAAGAGGGG   1272

BSNT_02557___   1273 AGACTTGTCAAATGA   1287
                     ||||||||.||||||
BL02274___pyr   1273 AGACTTGTAAAATGA   1287


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