Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02580 and BL02293
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02580___gmk.1.5803.seq
# -bsequence dna-align/BL02293___gmk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02580___gmk-BL02293___gmk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02580___gmk-BL02293___gmk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02580___gmk
# 2: BL02293___gmk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 620
# Identity: 483/620 (77.9%)
# Similarity: 483/620 (77.9%)
# Gaps: 10/620 ( 1.6%)
# Score: 1864.0
#
#
#=======================================
BSNT_02580___ 1 ATGAAAGAAAGAGGTTTATTAATCGTTCTCTCAGGTCCCTCAGGAGTTGG 50
|||||||||||||||||.||||||||||||||.||.||.||.||.||.||
BL02293___gmk 1 ATGAAAGAAAGAGGTTTGTTAATCGTTCTCTCCGGCCCTTCCGGCGTCGG 50
BSNT_02580___ 51 TAAAGGAACGGTTCGACAAGCGATCTTTTCGCAGGAAGACACAAAATTTG 100
.||||||||.||..|.||.|||.|.|||.|.|||||.|||||||||||||
BL02293___gmk 51 AAAAGGAACAGTCAGGCAGGCGCTGTTTGCTCAGGAGGACACAAAATTTG 100
BSNT_02580___ 101 AATATTCGATTTCAGTAACCACAAGAAGTCCAAGAGAGGGCGAAGTGA-A 149
|||||||||||||.||.||.|||||||..||..|..|.|||||| .|| |
BL02293___gmk 101 AATATTCGATTTCGGTGACGACAAGAAAACCGCGTCAAGGCGAA-AGAGA 149
BSNT_02580___ 150 CGGAGTCGATTATTTTTTCAAAACAAGAGATGAATTCGAGCAAATGATTG 199
|||.|||||.||.|||||.||.||..|.||.||.|||||..|.|||||.|
BL02293___gmk 150 CGGCGTCGACTACTTTTTTAAGACGCGCGAAGAGTTCGAAGAGATGATCG 199
BSNT_02580___ 200 CGGACAACAAGCTGCTTGAATGGGCAGAGTATGTCGGCAATTATTACGGC 249
.|.|||||||||||||.||||||||.||.|||||||||||.||||||||.
BL02293___gmk 200 AGAACAACAAGCTGCTCGAATGGGCCGAATATGTCGGCAACTATTACGGA 249
BSNT_02580___ 250 ACGCCAGTCGATTATGTTGAACAGACGCTTCAAGATGGAAAAGACGTCTT 299
||.||.||.||.||.||.||||||||||||.||...||||..|||||.||
BL02293___gmk 250 ACACCCGTTGACTACGTCGAACAGACGCTTGAAAGCGGAAGGGACGTTTT 299
BSNT_02580___ 300 TTTAGAAATTGAAGTTCAAGGGGCTCTTCAAGTGAGAAATGCTTTCCCGG 349
|.|.|||||.|||||.||.||.||.||.|||||.|||||.||.||.||.|
BL02293___gmk 300 TCTTGAAATCGAAGTCCAGGGTGCGCTGCAAGTCAGAAAGGCATTTCCTG 349
BSNT_02580___ 350 AAGGCCTGTTTATTTTCCTTGCGCCTCCAAGCCTTTCTGAACTGAAAAAC 399
|||||.|||||||.||..|.||||||||.|||||..|.|||.||||||||
BL02293___gmk 350 AAGGCTTGTTTATCTTTTTGGCGCCTCCGAGCCTCGCCGAATTGAAAAAC 399
BSNT_02580___ 400 AGAATCGTGACACGAGGCACAGAAACAGACGCTCTGATTGAAAATCGAAT 449
.|.||.||.|||.||||.|||||||||||.||...|||.|||||.||.||
BL02293___gmk 400 CGGATTGTCACAAGAGGGACAGAAACAGAAGCCACGATCGAAAACCGGAT 449
BSNT_02580___ 450 GAAAGCTGCAAAAGCTGAGATCGAAATGATGGATGCTTATGACTATGTCG 499
||||||.||.||.|..||.||||||.|||||||.||.|||||||||||.|
BL02293___gmk 450 GAAAGCGGCGAAGGAAGAAATCGAACTGATGGACGCCTATGACTATGTTG 499
BSNT_02580___ 500 TTGAAAACGATAATGTCGAAACGGCT----TGCGATAAAATCAAAGCAAT 545
|.|||||.||.|...|.|| ||| |||||.|.||||||||||||
BL02293___gmk 500 TCGAAAATGACAGCATTGA----GCTTGCGTGCGAAAGAATCAAAGCAAT 545
BSNT_02580___ 546 CGTTCTTGCTGAACATTTGAAGCGTGAACGCGTTGCACCAAGATATAAGA 595
||||||.||.||||||||...|||.||.||.|||||.|||||||||||||
BL02293___gmk 546 CGTTCTCGCCGAACATTTACGGCGCGACCGAGTTGCTCCAAGATATAAGA 595
BSNT_02580___ 596 AAATGCTGGAGGTTGAATAA 615
||||||||||||||||||||
BL02293___gmk 596 AAATGCTGGAGGTTGAATAA 615
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