Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02589 and BL02301
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence dna-align/BSNT_02589___prpC.1.5803.seq
# -bsequence dna-align/BL02301___prpC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02589___prpC-BL02301___prpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02589___prpC-BL02301___prpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02589___prpC
# 2: BL02301___prpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 806
# Identity: 557/806 (69.1%)
# Similarity: 557/806 (69.1%)
# Gaps: 82/806 (10.2%)
# Score: 1819.5
#
#
#=======================================
BSNT_02589___ 1 TTGTTAACAGCCTTAAAAACAGATACAGGAAAAATCCGCCAGCATAATGA 50
|||..|||||||||||||||.||.|..||||||||.||||||||.|||||
BL02301___prp 1 TTGAAAACAGCCTTAAAAACGGACAGGGGAAAAATACGCCAGCACAATGA 50
BSNT_02589___ 51 AGATGATGCGGGGATATTCAAGGGGAAAGATGAATTTATATTAGCGGTTG 100
|||.|||||.||.||.||||..|..|||.|.|.|.|..|||||||.||||
BL02301___prp 51 AGACGATGCCGGCATTTTCACAGAAAAAAACGGACTGGTATTAGCTGTTG 100
BSNT_02589___ 101 TC-GCTGATGGCATGGGCGGCCATCTTGCTGGAGATGTTGCGAGCAAGAT 149
|| || |||||.|||||.||.|||||.||.||.|||||.||.||||.|||
BL02301___prp 101 TCTGC-GATGGAATGGGAGGTCATCTGGCCGGCGATGTCGCCAGCAGGAT 149
BSNT_02589___ 150 GGCTGTGAAAGCCATGGGGGAGAAATGGAATGAAGCAG-AGACGATTCCA 198
|||.||...||||.|..|.||.|..|||.|.|||.|.| |||.| |.||.
BL02301___prp 150 GGCCGTCTCAGCCCTTCGTGATATTTGGGAGGAAACCGAAGAAG-TCCCG 198
BSNT_02589___ 199 ACTGCGCCCTCGGAATGTGAAAAATGGCTCATTGAACAGATTCTTTCGGT 248
.||.||||..|.|||.|.|||...|||||.|..||.||||||....|.||
BL02301___prp 199 GCTTCGCCGGCTGAAAGCGAAGCGTGGCTGAAAGAGCAGATTTCAGCCGT 248
BSNT_02589___ 249 AAACAGCAAAA--TATACGATCATGCTCAA--GCCCACGAAGAATGCCAA 294
.||| ||||| |.|.|||.||| ||.| |||||||||||.|||||.
BL02301___prp 249 CAAC--CAAAAACTTTTCGACCAT--TCGAGGGCCCACGAAGAGTGCCAG 294
BSNT_02589___ 295 GGCATGGGGACGACGATTGTATGTGCACTTTTT--ACGGGGAAAACGGTT 342
||.||||||||.|||.|.| |.|||.||||.| |||||.||||||.|.
BL02301___prp 295 GGAATGGGGACAACGGTCG--TCTGCGCTTTATACACGGGAAAAACGCTG 342
BSNT_02589___ 343 TCTGTTGCCCATATCGGAGACAGCAGATGCTATTTGCTTCAGGACGATGA 392
.|.||.||||||||||||||||||.|.||||||.|.||.||.|.|| ||
BL02301___prp 343 ACGGTCGCCCATATCGGAGACAGCCGCTGCTATCTCCTGCAAGGCG--GA 390
BSNT_02589___ 393 --TTTCGTTCAAGTGACAGAAGACCATTCGCTTGTAAATGAACTGGTTCG 440
||||.|.||..||||.|||||.||.||||||||.||||||||.||.||
BL02301___prp 391 AGTTTCATACAGCTGACGGAAGATCACTCGCTTGTCAATGAACTCGTGCG 440
BSNT_02589___ 441 CACTGGAGAGATCTCCAGAGAAGACGCTGAACATCATCCGCGAAAAAATG 490
.|||||.|.|||.||.|..||.||.||||||||.||||||||.|||||.|
BL02301___prp 441 GACTGGGGGGATTTCGAAGGAGGATGCTGAACACCATCCGCGGAAAAACG 490
BSNT_02589___ 491 TGTTGACGAAGGCGCTTGGAACAGA-CCAGTCAGTCA--GTATTGACACC 537
||.|.||.||.|||||.||.||||| ||.| .|||.| ||| ||..||
BL02301___prp 491 TGCTCACAAAAGCGCTCGGCACAGATCCCG-AAGTGAAGGTA--GAAGCC 537
BSNT_02589___ 538 CGTTCCTTTGATATAGAACCCGGAGACAAACTGCTTCTATGTTCTGACGG 587
|...|.|||||.||.|||||.||.||..||.||||..|||||||||||||
BL02301___prp 538 CACACATTTGAAATCGAACCGGGTGATCAAGTGCTATTATGTTCTGACGG 587
BSNT_02589___ 588 ACTGACGAATAAAGTGGA-----AGGCACTGA--GTTA----AAAGACAT 626
.||||||||||||||||| ||.|||||| |.|| .|.||| |
BL02301___prp 588 GCTGACGAATAAAGTGGATGATGAGACACTGAAGGATATGCTCACGAC-T 636
BSNT_02589___ 627 C------CTGC-------AAAGCGATTCAGCTC-CTCAGGAAAAAGTAAA 662
| |||| ||||||..||||||| .||||
BL02301___prp 637 CTTTCTTCTGCGGAGGAGAAAGCGGATCAGCTCGTTCAG----------- 675
BSNT_02589___ 663 CCTGCTTGTGGACAAAGCCAATCAGAACGGCGGAGAAGACAACATCAC-- 710
||| ||||||.|.||||||||.||||||||.|||||
BL02301___prp 676 -CTG------------GCCAATGACAACGGCGGCGAAGACAATATCACCG 712
BSNT_02589___ 711 -AGCAGTTTTGCTTGAGCTTGCTTTACAAGTTGAAGAGGGTGAAGATCAG 759
.||..|.||| ||.|||.|||..|||.|||||||.||||||||..||
BL02301___prp 713 TCGCGCTATTG---GAACTTCCTTCTCAAATTGAAGAAGGTGAAGACAAG 759
BSNT_02589___ 760 TGCTAA 765
||.|||
BL02301___prp 760 TGTTAA 765
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