Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02590 and BL02302
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence dna-align/BSNT_02590___prkC.1.5803.seq
# -bsequence dna-align/BL02302___prkC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02590___prkC-BL02302___prkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02590___prkC-BL02302___prkC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02590___prkC
# 2: BL02302___prkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2032
# Identity: 1426/2032 (70.2%)
# Similarity: 1426/2032 (70.2%)
# Gaps: 143/2032 ( 7.0%)
# Score: 4788.5
#
#
#=======================================
BSNT_02590___ 1 GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGCGTTAT 50
|||.|||||||||..|||||||||||.||||||.||||.||.||||..||
BL02302___prk 1 GTGTTAATCGGCAGACGGATCAGCGGACGTTACGAAATCCTGCGCGCCAT 50
BSNT_02590___ 51 AGGCGGCGGGGGAATGGCCAACGTGTATTTAGCTGAGGATATCATTCTAG 100
.|||||||||||.|||||.|||||.||||||||...|||.|||||.||.|
BL02302___prk 51 CGGCGGCGGGGGGATGGCGAACGTTTATTTAGCGCTGGACATCATCCTCG 100
BSNT_02590___ 101 ACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACT---------ATGCA 141
|||||||||||||.||||||.|.||||||||||||| ||||
BL02302___prk 101 ACCGTGAAGTCGCGATTAAAGTGCTGCGGTTTGACTTCGTTCACGATGC- 149
BSNT_02590___ 142 AATGACAATGAATTTATCAGACGTTTCCGCAGAGAAGCCCAATCCGCATC 191
.||.||||||||.||.|||.|..|.|||||.||.|||||..|
BL02302___prk 150 --------CGATTTTATCAGGCGGTTCAGACGGGAAGCGCAGTCCGCTGC 191
BSNT_02590___ 192 AAGCCTCGATCACCCGAATATTGTCAGCATTTACGATTTGGGCGAGGAAG 241
|||||||||.|||||||||||.|||||||||||.|||.|.||.||.||||
BL02302___prk 192 AAGCCTCGACCACCCGAATATCGTCAGCATTTATGATGTCGGAGAAGAAG 241
BSNT_02590___ 242 ATGATATTTATTATATTGTCATGGAATACGTTGAAGGCATGACGCTTAAA 291
||||.||.||||||||.||.|||||.||.||.||.||.|||||.||.|||
BL02302___prk 242 ATGACATCTATTATATCGTGATGGAGTATGTCGAGGGGATGACCCTGAAA 291
BSNT_02590___ 292 GAATACATAACAGC-AAATGGGCCACTTCACCCTAAAGAAGCGCTGAACA 340
|||||||||| |.| ||..||.||||||||.||.|||||||||.|..|.|
BL02302___prk 292 GAATACATAA-ATCGAACAGGCCCACTTCATCCGAAAGAAGCGGTCCAAA 340
BSNT_02590___ 341 TCATGGAGCAAATAGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATT 390
||||||||||.||.||.||.||||||||.|||||||||.|.|||||||||
BL02302___prk 341 TCATGGAGCAGATCGTATCCGCCATCGCACATGCCCATGATAACCAGATT 390
BSNT_02590___ 391 GTTCACAGAGACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAA 440
||.|||.|.||.||.|||||.||.|||||||||||.||.||||||||..|
BL02302___prk 391 GTCCACCGGGATATTAAGCCCCACAACATTTTGATCGACCATATGGGCCA 440
BSNT_02590___ 441 TATCAAAGTAACGGATTTTGGAATTGCGACGGCACTAAGTTCGACCACAA 490
.||.|||||.||.|||||.||.||.||.|.|||.||.||.|||||.||.|
BL02302___prk 441 CATTAAAGTGACTGATTTCGGCATCGCCATGGCGCTCAGCTCGACGACCA 490
BSNT_02590___ 491 TCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAA 540
||||.||.|||||.||.|||.|||||||.||||||||.||.||.||.|||
BL02302___prk 491 TCACGCACACCAACTCGGTTTTGGGCTCTGTCCATTATTTGTCGCCCGAA 540
BSNT_02590___ 541 CAGGCCCGGGGCGGCTTAGCCACAAAGAAATCGGATATTTATGCGCTTGG 590
|||||..|.|||||.|||.|.||.||.|||||.|||||.||..||||.||
BL02302___prk 541 CAGGCGAGAGGCGGATTATCGACGAAAAAATCCGATATCTACTCGCTCGG 590
BSNT_02590___ 591 AATCGTTCTATTTGAGCTTTTAACCGGC-CGTATTCCGTTTGATGGAGAG 639
.|||||.||.||.|||||..|.| |||| |||||.||||||||.|||||.
BL02302___prk 591 CATCGTGCTTTTCGAGCTGCTGA-CGGCGCGTATGCCGTTTGAAGGAGAA 639
BSNT_02590___ 640 TCAGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGC 689
||.||.|||||||||||..||||.|||||.|||.|.|||||.||.||||.
BL02302___prk 640 TCGGCGGTCAGCATCGCGCTGAAACATCTCCAATCAGAAACGCCGTCGGT 689
BSNT_02590___ 690 AAAAAGGTGGAATCCATCGGTCCCCCAAAGCGTTGAAAACATCATACTCA 739
.|||||.|||||.||..|.||.||.||||||.|.||||||.||.|.||.|
BL02302___prk 690 GAAAAGATGGAACCCGGCCGTGCCGCAAAGCATAGAAAACGTCGTCCTGA 739
BSNT_02590___ 740 AGGCAACTGCCAAAGATCCTTTTCATCGCTACGAAACGGCTGAAGACATG 789
|.||.|..||.||||||||.||.||||||||.|||.||||.|||||.|||
BL02302___prk 740 AAGCGATGGCAAAAGATCCATTCCATCGCTATGAAGCGGCCGAAGAGATG 789
BSNT_02590___ 790 GAAGCAGACATAAAAACAGCTTTTGATGCCGACAGACTCAATGAAAAGAG 839
|||...||..|.|||||.|||||.||..|.|||.|.|||||.||||||.|
BL02302___prk 790 GAAAACGATTTGAAAACGGCTTTCGACCCGGACCGGCTCAACGAAAAGCG 839
BSNT_02590___ 840 ATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATACCTATCATTA 889
.||.|||||||.|...|||||.||.|||||.|||||..|.||.|||||.|
BL02302___prk 840 CTTCACGATTCCATCCGATGATGAGATGACGAAAGCAGTTCCGATCATCA 889
BSNT_02590___ 890 AAGAT------GAAGAA---------CTCGCTAAAGCTGCTGGCGAAAAA 924
|..|| ||| || ||||| ||.|.|..|||| .|
BL02302___prk 890 AGAATCTGCCGGAA-AACGGGAGCAGCTCGC--AATCCGGCGGCG---GA 933
BSNT_02590___ 925 GAAGCTGAAGTGAC----------AACCGCACAAGAAAA----------- 953
||||..||||.|.| || |.|||||||
BL02302___prk 934 GAAGAGGAAGCGGCTCCATTATCAAA----AAAAGAAAAGAAGAAGCAGG 979
BSNT_02590___ 954 CAAAA-CAAAGAAGAACGGTAAAAGAAAAAAGTGGCCGTGGGTTTTGCTC 1002
||||| ||||.|||||....||||||||.||.||||||....|.|||||.
BL02302___prk 980 CAAAAGCAAACAAGAAGAAAAAAAGAAAGAAATGGCCGCTTATATTGCTG 1029
BSNT_02590___ 1003 ACGATATGCCTCGTTTT-------TATCACAGCTGGAATTCTT-GCTGTC 1044
|||.|.|...|||||.| | ||||.| |||| |||.|.
BL02302___prk 1030 ACGGTGTTTTTCGTTCTGGCTGCGT----CAGCCG----TCTTGGCTTTA 1071
BSNT_02590___ 1045 ACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGT 1094
||.||.|||||||||||.||.||.||.||.|||||.....|.||.|||||
BL02302___prk 1072 ACGGTGTTTCCGTCGCTCTTTATTCCGAAAGATGTGGCCGTTCCCGATGT 1121
BSNT_02590___ 1095 CTCCGGAATGGAATACGAAAAAGCCG----CAGGGCTCTTGGAAAAAGAA 1140
..||||..|.|||||.|||.|||||| ||.| ||| |||.|.|||
BL02302___prk 1122 TGCCGGCCTTGAATATGAAGAAGCCGTCATCAAG---CTT-GAAGACGAA 1167
BSNT_02590___ 1141 GGTTTACAGGTTGATTCCGAGTTGTTG--GAAATCTCAGATGAAAAAATT 1188
||.||..|.||||| ||||| .||.|| ||.||..|.||.||.||||||
BL02302___prk 1168 GGATTTGAAGTTGA-TCCGA-ATGCTGAAGACATTGCCGACGATAAAATT 1215
BSNT_02590___ 1189 GAAGAGGGCCTGATGGTAAAAACGGATCCTAAAGC---GGATACCACAGT 1235
|||||.||.|||||.||.||.|||||.|||..||| .||||.| ||
BL02302___prk 1216 GAAGAAGGGCTGATCGTGAAGACGGACCCTGCAGCCGGCGATATC---GT 1262
BSNT_02590___ 1236 CAAAGAAGGCGCCACGGTCACCCTTTATAAGAGCACCGGAAAAGCAAAAA 1285
.||.|||||..|.||.||||..||.|||||.|||.|.||.||||..||||
BL02302___prk 1263 GAAGGAAGGTTCAACTGTCAAGCTATATAAAAGCTCAGGCAAAGAGAAAA 1312
BSNT_02590___ 1286 CGGAGATCGGTGATGTGACAGGCCAAACGGTCGA-----CCAGGCAAAAA 1330
|.||..|||.|||||||...|||||.|..||||| || ||.
BL02302___prk 1313 CTGAAGTCGATGATGTGGTCGGCCAGAAAGTCGATGCCGCC------AAG 1356
BSNT_02590___ 1331 AAGC--GTTGAAGGACCAAGGGTTT--AAACATGTA-ACAGTAAATGAAG 1375
|||| .||| ||.|..||||.||| ||||||..| |||| |.||||
BL02302___prk 1357 AAGCTTCTTG-AGCAAAAAGGCTTTAAAAACATCAAGACAG---AAGAAG 1402
BSNT_02590___ 1376 TGAATGACG-AGAAAAATGCGGGCACTGTCATTGACCAAAATCCTTCAGC 1424
||.|.||.| ||||.|| |||||.||..||||.||.||..|.|||.||||
BL02302___prk 1403 TGCACGATGAAGAAGAA-GCGGGAACCATCATCGAACAGGACCCTGCAGC 1451
BSNT_02590___ 1425 AGGGACTGAGCTTGT-----CCCGAGTGAAGATCAAGTCAAACTTACAGT 1469
.||.||.||..|.|| || ||.||..|.||||||.|.||.||
BL02302___prk 1452 CGGAACCGAAATCGTTGCCGCC-----GACGACGAGGTCAAATTAACGGT 1496
BSNT_02590___ 1470 CAGTATCGGACCCGAAGACATTACGCTTAGAGACTTGAAAACCTATAGTA 1519
|||..||||.||.||||.||||||..|.||.||.||.|||||.||.||.|
BL02302___prk 1497 CAGCCTCGGTCCGGAAGCCATTACTTTAAGGGATTTAAAAACATACAGCA 1546
BSNT_02590___ 1520 AAGAAGCAGCGTCTGGATATCTGGAAGA-CAACGGATTGAAGCTTGTAGA 1568
||.|.||.||.||.||.|||.||||.|| ||.|.|.||| ..|||||.||
BL02302___prk 1547 AACAGGCGGCTTCGGGCTATTTGGACGACCATCAGCTTG-TCCTTGTCGA 1595
BSNT_02590___ 1569 AAAAGAAGCATACTCAGATGATGTTCCAGAAGGACAGGTTGTCAAACAAA 1618
|||.||.||..|.||.||.||.||.||.|||||.|||||..|.|||||||
BL02302___prk 1596 AAAGGAGGCGCATTCTGAAGACGTGCCGGAAGGTCAGGTCATTAAACAAA 1645
BSNT_02590___ 1619 AACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACA 1668
|.||.|..||.||..|..||||.|||||||||.||.||||.||.||.||.
BL02302___prk 1646 AGCCGGAGGCGGGGGCATCAGTCAAGCCGGGAGACAAAGTCGAGGTCACG 1695
BSNT_02590___ 1669 TTCTCTCTCGGACCAGAGAAAAAACCTGCGAAAACAGTGA--AAGAAAAG 1716
||.||.||||||||..|..||||.||.|..|||||.|||| .||||||
BL02302___prk 1696 TTTTCGCTCGGACCTAAACAAAAGCCCGTCAAAACGGTGACCGAGAAAA- 1744
BSNT_02590___ 1717 GTCAAGATCCCCTACGAACCAGAAAATGAAGGGGACGAGCTTCAAGTGCA 1766
|..|.||.||.||.|||||.|.|...|..||.||.||.|...|.||.||
BL02302___prk 1745 -TTGATATTCCTTATGAACCGGGAGCGGCGGGCGAAGAACAAAACGTCCA 1793
BSNT_02590___ 1767 AATCGCGGTTGACGATGCGGATCACAGCATCTCTGACACTTACGAAGAAT 1816
|||..||.|.||.||||..||.||||||||.||||||...|||||| |||
BL02302___prk 1794 AATTTCGATCGATGATGAAGAACACAGCATTTCTGACGTCTACGAA-AAT 1842
BSNT_02590___ 1817 TT-AAGATAAAAGAGCCGACTGAACGAACGATCGAACTAAAGATTGAACC 1865
|| ||.||.|.||.||||.|.||.||.||||||.||.|.|.|||||..||
BL02302___prk 1843 TTCAAAATCACAGCGCCGGCAGAGCGGACGATCAAATTCAGGATTGCGCC 1892
BSNT_02590___ 1866 CGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCT 1915
|||||||||||||||.||||||||||.|.|.|||.|||||||.|||||.|
BL02302___prk 1893 CGGCCAAAAAGGGTATTATCAAGTAACGATCAACGATAAAGTAGTCAGGT 1942
BSNT_02590___ 1916 ACAAAACCATTGAGTATCCGAAAGATGAATAA 1947
..|||||.|||||.|||||..|.|||||||||
BL02302___prk 1943 CAAAAACGATTGAATATCCTGAGGATGAATAA 1974
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