Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02597 and BL02307
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_02597___yloU.1.5803.seq
# -bsequence dna-align/BL02307___yloU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02597___yloU-BL02307___yloU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02597___yloU-BL02307___yloU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02597___yloU
# 2: BL02307___yloU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 296/365 (81.1%)
# Similarity: 296/365 (81.1%)
# Gaps: 4/365 ( 1.1%)
# Score: 1199.0
#
#
#=======================================
BSNT_02597___ 1 GTGTCCATTGAATTAAGAACGAAGTACGGACAGATTGATATATCTAATGA 50
||||||||||||||..||||.||.||||||||||||||||||||.||.||
BL02307___ylo 1 GTGTCCATTGAATTCCGAACAAAATACGGACAGATTGATATATCAAACGA 50
BSNT_02597___ 51 AGTCATCGCGATGGTTGCAGGAGGCGCGGCGGTTGACTGTTACGGCATTG 100
|||..||||.|||||||||||||||||.|||.|.|||||.|||||.||.|
BL02307___ylo 51 AGTGGTCGCCATGGTTGCAGGAGGCGCAGCGATCGACTGCTACGGGATCG 100
BSNT_02597___ 101 TCGGCATGGCCTCTAAAAACCAGATTAAAGACGGACTGACTGAAATCCTT 150
|.||.|||||.||.||.|||||.||||||||||||||||||||||||||.
BL02307___ylo 101 TAGGTATGGCATCCAAGAACCAAATTAAAGACGGACTGACTGAAATCCTC 150
BSNT_02597___ 151 CGGAAAGAGAA--TTTCAGCAGGGGTGTCCAAGTTCGCCAAGAAGGAGAA 198
.|.|||||.|| ||.|| ||.||.|||...||.|||||.||||..||.
BL02307___ylo 151 AGAAAAGAAAACTTTGCA--AGAGGCGTCATCGTCCGCCAGGAAGAGGAT 198
BSNT_02597___ 199 CAGATACATATCGACATGTATATCATTGTCAGCTACGGCACGAAAATTTC 248
|..||.|||||.||||||||.|||||||||||||||||.||.||||||||
BL02307___ylo 199 CGTATTCATATTGACATGTACATCATTGTCAGCTACGGAACAAAAATTTC 248
BSNT_02597___ 249 TGAAGTGGCACATAATGTCCAAACAAAAGTAAAGTACACAGTAAATCAAA 298
.|||||||||||||||||.|||||||||||.||.||.||..|..|.||.|
BL02307___ylo 249 AGAAGTGGCACATAATGTTCAAACAAAAGTCAAATATACGCTCGACCATA 298
BSNT_02597___ 299 CCATCGGACTGGCAGTGGACTCTGTCAATATTTATGTCCAAGGCGTACGA 348
|..|.||.||.||||||||.||.||.||||||||.||.|||||.||||||
BL02307___ylo 299 CAGTGGGTCTTGCAGTGGATTCCGTAAATATTTACGTTCAAGGAGTACGA 348
BSNT_02597___ 349 GTGACGAACCCGTAG 363
|||||||||||||||
BL02307___ylo 349 GTGACGAACCCGTAG 363
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