Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02606 and BL02315

See Amino acid alignment / Visit BSNT_02606 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:17
# Commandline: needle
#    -asequence dna-align/BSNT_02606___fabG.1.5803.seq
#    -bsequence dna-align/BL02315___fabG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02606___fabG-BL02315___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02606___fabG-BL02315___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02606___fabG
# 2: BL02315___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 763
# Identity:     557/763 (73.0%)
# Similarity:   557/763 (73.0%)
# Gaps:          41/763 ( 5.4%)
# Score: 1962.0
# 
#
#=======================================

BSNT_02606___      1 ATGCTTAATGATAAAACGGCTATTGTCACTGGCGCATCCCGCGGAATCGG     50
                     |||||..|..|||||||.||..||||.||.||.||.||..|.||||||||
BL02315___fab      1 ATGCTGGAAAATAAAACAGCCGTTGTGACAGGAGCCTCAAGAGGAATCGG     50

BSNT_02606___     51 CCGCTCAATCGCCCTTGATCTGGCAAAAAGCGGAGCAAATGTTGTCGTGA    100
                     ||||.|.||||||||.||.|||||.||||.||||||||||||.|||||.|
BL02315___fab     51 CCGCGCGATCGCCCTGGACCTGGCGAAAAACGGAGCAAATGTCGTCGTCA    100

BSNT_02606___    101 ACTACTCCGGCAATGAAGCGAAAGCAAATGAAGTGGTAGATGAAATCAAA    150
                     |||||.|.||.||||||||||||||.||.|||||.|||||.|||||||||
BL02315___fab    101 ACTACGCGGGAAATGAAGCGAAAGCGAACGAAGTCGTAGACGAAATCAAA    150

BSNT_02606___    151 TCAATGGGCAGAAACGCAATTGCTGTAAAAGCGGATGTATCAAATCCCGA    200
                     .|..|.|||.|..|.||..|||||.|.||||||||.||.||.|||.|.||
BL02315___fab    151 GCGCTCGGCCGCGATGCGTTTGCTTTTAAAGCGGACGTTTCCAATGCGGA    200

BSNT_02606___    201 AGATGTACAAAACATGATAAAAGAAACATTGTCTGTTTTTTC--TACGAT    248
                     .||.||.||....|||||.||.|||.|  .|||.|....|||  .|||.|
BL02315___fab    201 TGAGGTTCAGGCGATGATGAAGGAAGC--GGTCGGACGCTTCGGCACGCT    248

BSNT_02606___    249 TGACATTCTAGTTAATAATGCGGGAATTACAAGAGACAATCTCATCATGA    298
                     ||||||.||.||.||.||||||||.|||||.|.|||||||||..||||||
BL02315___fab    249 TGACATCCTTGTCAACAATGCGGGCATTACTAAAGACAATCTGTTCATGA    298

BSNT_02606___    299 GAATGAAAGAAGACGAATGGGATGACGTCATTAACATTAACCTGAAGGGT    348
                     |||||||||||||.||||||||.||||||||||||||.|||.|.||.|||
BL02315___fab    299 GAATGAAAGAAGATGAATGGGACGACGTCATTAACATAAACTTAAAAGGT    348

BSNT_02606___    349 GTTTTCAACTGCACAAAAGCTGTTACAAGACAAATGATGAAAC-----AG    393
                     ||.|||||.||..||||||||||.||||||||.||||||||||     ||
BL02315___fab    349 GTGTTCAATTGTTCAAAAGCTGTGACAAGACAGATGATGAAACAAAGAAG    398

BSNT_02606___    394 CGTTCAGGCCGCATTATTAACGTAT--CGTCTATCGTCGGCGTCAGCGGA    441
                     |     |||||.||.||.||  |||  |.||..|.||.||||||..|||.
BL02315___fab    399 C-----GGCCGGATCATCAA--TATCACCTCGGTTGTAGGCGTCGTCGGT    441

BSNT_02606___    442 AACCCTGGACAGGCCAACTACGTGGCTGCAAAAGCCGGCGTCATCGGTTT    491
                     |||.|.||.|||||||||||.||.||.||.|||.|.|||||.|||||.||
BL02315___fab    442 AACGCCGGGCAGGCCAACTATGTCGCGGCTAAATCAGGCGTGATCGGCTT    491

BSNT_02606___    492 AACCAAGTCTTCT-GCTAAAGAGCT--CGCCAGCCGAAATATTACGGTAA    538
                     .||.||..| .|| ||.|||||.||  ||.||  .||||.||.||.||.|
BL02315___fab    492 GACGAAAAC-GCTGGCAAAAGAACTGGCGTCA--AGAAACATCACTGTGA    538

BSNT_02606___    539 ACGCAATAGCGCCAGGATTTATCTCAACTGATATGACAGATAAACTTGCA    588
                     |.||.||.||.||.|||||.||.||.||.||.|||||.||.||.||..||
BL02315___fab    539 ATGCGATCGCTCCGGGATTCATTTCGACGGAAATGACGGACAAGCTGACA    588

BSNT_02606___    589 AAAGACGTTCAAGACGAAATGCTGAAACAAATTCCGCTCGCGCGCTTTGG    638
                     ||||||.|||||||||||||||||||.||.||||||||.|||||.||.||
BL02315___fab    589 AAAGACATTCAAGACGAAATGCTGAAGCAGATTCCGCTTGCGCGGTTCGG    638

BSNT_02606___    639 TGAACCTAGCGATGTCAGCAG---TGTTGTCACGTTCCTAGCTTCAGA--    683
                     .||.||....||..|||||||   .|||||   .|||||.||.||.||  
BL02315___fab    639 CGAGCCGTCTGACATCAGCAGCGCCGTTGT---TTTCCTCGCATCTGACC    685

BSNT_02606___    684 --GGGAGCCCGTTATATGACAGGCCAAACGCTTCATATTGACGGCGGAAT    731
                       |.||||    ||.|||||.|||||.|||||..|.||..||||||||||
BL02315___fab    686 ATGCGAGC----TACATGACCGGCCAGACGCTGAACATCAACGGCGGAAT    731

BSNT_02606___    732 GG---TGATGTAA    741
                     ||   ||.|.|||
BL02315___fab    732 GGCTATGGTTTAA    744


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02606 and BL02315

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
