Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02617 and BL02325

See Amino acid alignment / Visit BSNT_02617 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence dna-align/BSNT_02617___ylqD.1.5803.seq
#    -bsequence dna-align/BL02325___ylqD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02617___ylqD-BL02325___ylqD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02617___ylqD-BL02325___ylqD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02617___ylqD
# 2: BL02325___ylqD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity:     297/393 (75.6%)
# Similarity:   297/393 (75.6%)
# Gaps:          12/393 ( 3.1%)
# Score: 1086.0
# 
#
#=======================================

BSNT_02617___      1 ATGCAAATTATTCACCGTGTAGCCGTTATGCAAGTCTTAACCGAGCGCAG     50
                     |||||||||||.||.|||||..||||.|||||.||.||.||.||...|||
BL02325___ylq      1 ATGCAAATTATCCAACGTGTTACCGTCATGCAGGTTTTGACTGAAAACAG     50

BSNT_02617___     51 CAAAGAAAAGCTTTTAGCTTCTTTTGCCGAAAAGAAA-CAAATGCTTGAA     99
                     ||||.|||||||..|.||||||||||..| ||||||| .||||.|||||.
BL02325___ylq     51 CAAAAAAAAGCTGCTGGCTTCTTTTGAAG-AAAGAAAGGAAATCCTTGAG     99

BSNT_02617___    100 CGAGAATGCAGCCAGCTCTATTTTCAGCTTAGAAAACATGAGAAAGAACA    149
                     ||.|||||||.||||||||||||||||||.||.|||||.||.||.|||||
BL02325___ylq    100 CGCGAATGCAACCAGCTCTATTTTCAGCTCAGGAAACACGAAAAGGAACA    149

BSNT_02617___    150 GCAAAATCCTGATATGATTGAACAATTTAAAAAGGCAATAGAAAAGCGAA    199
                     .||.|||||.|....||.||||..|||||||||.|.|||.|||||.|||.
BL02325___ylq    150 CCACAATCCGGCGGCGACTGAATCATTTAAAAAAGAAATTGAAAAACGAC    199

BSNT_02617___    200 AAGATGATATAAAAATCATCGATTTTCAAATTGCTCAAGTACATACATTG    249
                     |.||..|.||.|||||.||||.|||||||||...||||.|.||.|||.||
BL02325___ylq    200 AGGACAAGATTAAAATGATCGTTTTTCAAATCAATCAAATCCACACACTG    249

BSNT_02617___    250 CCGCTTGGCAGTGAGTTGAAAGAAAAGGAAGTCGATGCGCTGCT-----G    294
                     |||||||||||.||..|.||.|||||.|||.||||  ||||  |     |
BL02325___ylq    250 CCGCTTGGCAGCGAAGTAAAGGAAAAAGAAATCGA--CGCT--TTAATGG    295

BSNT_02617___    295 ACGATTGAAGCCGGGGATGACTGGCATGAGAAAACAGCAGCGAACACCAT    344
                     || |||||||.|||||||.|.||||||||.|..||.||.|..||.||.||
BL02325___ylq    296 AC-ATTGAAGTCGGGGATAATTGGCATGATATGACGGCGGGAAAAACAAT    344

BSNT_02617___    345 CGTCATAAAAGACGGAAAAGTAATTGAAATTCGCCAGAGGTGA    387
                     |||.||.||||||||.|..||.|||||||||||.|.|||||||
BL02325___ylq    345 CGTGATTAAAGACGGGATCGTCATTGAAATTCGTCCGAGGTGA    387


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.