Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00025 and BL02354
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_00025___yaaE.1.5803.seq
# -bsequence dna-align/BL02354___pdxT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00025___yaaE-BL02354___pdxT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00025___yaaE-BL02354___pdxT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00025___yaaE
# 2: BL02354___pdxT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 603
# Identity: 442/603 (73.3%)
# Similarity: 442/603 (73.3%)
# Gaps: 24/603 ( 4.0%)
# Score: 1536.0
#
#
#=======================================
BSNT_00025___ 1 ATGTTAACAATAGGTGTACTAGGACTTCAAGGAGCAGTTAGAGAGCACAT 50
|||.|.|||||.||||||||.||||||||.||||||||.|||||.|||||
BL02354___pdx 1 ATGCTGACAATTGGTGTACTTGGACTTCAGGGAGCAGTAAGAGAACACAT 50
BSNT_00025___ 51 CCATGCGATTGAAGCATGCGGCGCGGCTGGTCTTGTCGTAAAACGTCCGG 100
.|...|.||||||||||||||.|||||.||....|||.|.||..|.||||
BL02354___pdx 51 TCGCTCAATTGAAGCATGCGGAGCGGCCGGAAAAGTCATCAAGTGGCCGG 100
BSNT_00025___ 101 AGCAGCTGAACGAAGTTGACGGGTTGATTTTGCCGGGCGGTGAGAGCACG 150
|..||.|.||.|||.|.|||||.|||||||||||.||.||.||.||||||
BL02354___pdx 101 AAGAGTTAAAGGAAATCGACGGTTTGATTTTGCCAGGAGGCGAAAGCACG 150
BSNT_00025___ 151 ACGATGCGCCGTTTGATCGATACGTATCAATTCATGGAGCCGCTTCGTGA 200
||||||.|.||..|.||||||||||||||.||.|||.||||.||||..||
BL02354___pdx 151 ACGATGAGGCGCCTCATCGATACGTATCAGTTTATGAAGCCTCTTCAGGA 200
BSNT_00025___ 201 ATTCGCTGC-TCAGGGCAAA-CCGATGTTTGGAACATGTGCCGGATTAAT 248
|||.||.|| ||.|| ||| |||.|.||||||||.|||||.||..|.||
BL02354___pdx 201 ATTTGCCGCATCCGG--AAAGCCGGTATTTGGAACTTGTGCTGGGCTGAT 248
BSNT_00025___ 249 TATATTAGCAAAAGAA-ATTGCCGGTTCAGATAATCCTCATTTAGGTCTT 297
|||..|.|| .||||| ||||||||..|..|..||.|.|||.|.||..||
BL02354___pdx 249 TATCCTGGC-GAAGAACATTGCCGGAACTAACGATGCCCATCTCGGGGTT 297
BSNT_00025___ 298 CTGAATGTGGTTGTAGAACGTAATTCATTTGGCCGGCAGGTTGACAGCTT 347
|||.||||....|||||.||.|||||.|||||..|.|||||.||||||||
BL02354___pdx 298 CTGGATGTAACGGTAGAGCGGAATTCCTTTGGAAGACAGGTGGACAGCTT 347
BSNT_00025___ 348 TGAAGCTGATTTAACAATTAAAGG-CTTGGACGAGCCTTTTACTGGGGTA 396
||||||.||.|||||..||||||| ||| ||.|..||.|||||.||.|||
BL02354___pdx 348 TGAAGCAGACTTAACCGTTAAAGGACTT-GAGGGACCGTTTACAGGCGTA 396
BSNT_00025___ 397 TTCATCCGTGCTCCGCATATTTTAGAAGCTGGTGAAAATGTTGAAGTTCT 446
||.|||||.||||||||.|||||.|||||.||.|.|.||||.|||||.||
BL02354___pdx 397 TTTATCCGCGCTCCGCACATTTTGGAAGCGGGCGCAGATGTAGAAGTGCT 446
BSNT_00025___ 447 ATCGGAGCATAATGGTCGTATTGTAGCCGCGAAACAGGGGCAATTC--CT 494
.|||||.||.||.||..|.||.||.||.||.|||||.|| ||.|| ||
BL02354___pdx 447 TTCGGAACACAACGGAAGAATCGTCGCTGCCAAACAAGG--AAATCTTCT 494
BSNT_00025___ 495 TGGCTGCTCATTCCATCCGGAGCTGACAGAAGATCACCGAGTGACGCAGC 544
.|||||.||.|||||.||.||||||||.||.||||||.||.|||||.|..
BL02354___pdx 495 CGGCTGTTCTTTCCACCCTGAGCTGACGGATGATCACAGAATGACGAAAT 544
BSNT_00025___ 545 TGTTTGTTGAAATGGTTGAGGAATATAAGCAAA------AGGCACTTGTA 588
|.|||||.||.||||| |||| |||||.| |.||..|.|||
BL02354___pdx 545 TATTTGTCGAGATGGT---GGAA---AAGCATAAACGGGAAGCCGTCGTA 588
BSNT_00025___ 589 TAA 591
|||
BL02354___pdx 589 TAA 591
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