Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00042 and BL02360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence dna-align/BSNT_00042___yaaL.1.5803.seq
# -bsequence dna-align/BL02360___yaaL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00042___yaaL-BL02360___yaaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00042___yaaL-BL02360___yaaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00042___yaaL
# 2: BL02360___yaaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 167/226 (73.9%)
# Similarity: 167/226 (73.9%)
# Gaps: 2/226 ( 0.9%)
# Score: 587.0
#
#
#=======================================
BSNT_00042___ 1 ATGGGTTTTCTTCGCAAGAA-AACATTAAGAAGAGAGTTTGATGAAAAAC 49
||||||||||||||.||.|| ||..|| ||||.|||.||||||.|.||.|
BL02360___yaa 1 ATGGGTTTTCTTCGGAAAAAGAAGCTT-AGAAAAGAATTTGATAACAAGC 49
BSNT_00042___ 50 TAACCGAGCAGCTTTTTAAGCAAAAGGAAGAGTGGAACAGGCAAAAAAAG 99
|....||.|||||..|..|.|||||||||||.||||||||||||||...|
BL02360___yaa 50 TGGTTGAACAGCTGATCCATCAAAAGGAAGAATGGAACAGGCAAAAGCGG 99
BSNT_00042___ 100 CTGGTCGAAAAAAGCTTAGAACCGTCTGCTGAAGTGTTATACGAACTGAA 149
|||.|.|||||.|||.||||.||.||..|.|||||..|.||||||.|.||
BL02360___yaa 100 CTGATTGAAAACAGCCTAGAGCCTTCCCCAGAAGTTCTTTACGAATTAAA 149
BSNT_00042___ 150 AGTAGCTGAAGCGAAGTATTTTTTTTACTTAAGGGAAGCGAAGCAGCGAA 199
.||.||.||.||.|||||.||||||||.||..|||||||.||..|..|||
BL02360___yaa 150 GGTTGCCGAGGCAAAGTACTTTTTTTATTTGCGGGAAGCAAAAAAAAGAA 199
BSNT_00042___ 200 ATTTAAAAATCAGCCGGTGGAAGTAA 225
||||||..|||.||.|.||||||||.
BL02360___yaa 200 ATTTAAGGATCGGCAGCTGGAAGTAG 225
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