Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00021 and BL02362
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:40
# Commandline: needle
# -asequence dna-align/BSNT_00021___yaaC.1.5803.seq
# -bsequence dna-align/BL02362___yaaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00021___yaaC-BL02362___yaaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00021___yaaC-BL02362___yaaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00021___yaaC
# 2: BL02362___yaaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1090
# Identity: 657/1090 (60.3%)
# Similarity: 657/1090 (60.3%)
# Gaps: 254/1090 (23.3%)
# Score: 1889.5
#
#
#=======================================
BSNT_00021___ 1 ATGACATATCATGAGTGGAAAGACTTAGCGCTATTTTACTCCGTTGAATC 50
|||..|.||.|.|..|||||.||.|||..|||||||||.||.||.|||.|
BL02362___yaa 1 ATGCAAGATAAAGGATGGAAGGATTTAAAGCTATTTTATTCGGTCGAAAC 50
BSNT_00021___ 51 AACCCAGAAATTTCTAGAAAAGGTTTATATCTTAA----ACGGTATTGAC 96
|.|||||.|.|||||.||||.|||.|||| || |.||.||.||.
BL02362___yaa 51 AGCCCAGCATTTTCTTGAAATGGTATATA----AAAATCAAGGAATGGAA 96
BSNT_00021___ 97 GATGCGAAAAAAAACTCTTTTAAAAACAGTGAACGGTTTA-TTTATTTCT 145
|||||.||||||||.||.|.|||||||.|.||.||||||| |||.|||||
BL02362___yaa 97 GATGCCAAAAAAAATTCCTATAAAAACGGAGAGCGGTTTATTTTTTTTCT 146
BSNT_00021___ 146 TAAAGCATGCCGAATCGTTTTATAAACAAGCCGCATATT--CTCCCTTAG 193
|||| |||||.|||.|.|||||.||.||||| ||.|.| ||.|.||.|
BL02362___yaa 147 TAAA-CATGCGGAAGCCTTTTACAAGCAAGC--CAAAATCGCTACGTTGG 193
BSNT_00021___ 194 AAATCAAACCGATTCTTTTATTTTATGGAATGGCACAGCTTATCAAAGCA 243
||||||||||||||.|.||||||||.||.|||||||||||..|.|||||.
BL02362___yaa 194 AAATCAAACCGATTTTATTATTTTACGGCATGGCACAGCTATTGAAAGCC 243
BSNT_00021___ 244 TGC---TTAATTACACGTGATCCTCATTATCCAAGCCATACATCAGTACT 290
||| |||||.||| ||||||...||||||||||||||.|||||.||
BL02362___yaa 244 TGCCTGTTAATGACA---GATCCTTCCTATCCAAGCCATACTTCAGTGCT 290
BSNT_00021___ 291 GGCACATGGCGTAACAACAAGAAAACGAAAGAAACAAAATTATTG-TTTT 339
.||.||||||||.||.||.|||||||||||.|||||||||||..| ||||
BL02362___yaa 291 CGCCCATGGCGTGACCACTAGAAAACGAAAAAAACAAAATTACCGCTTTT 340
BSNT_00021___ 340 AGCGATGATGAAGTGAAAATACAACGAAATGGACTATGCGTGCA------ 383
| .||.||||||||.|||||.|||.|.||.||.|||||..||||
BL02362___yaa 341 A-TGAAGATGAAGTAAAAATCCAAAGGAACGGCCTATGTATGCACGTCAT 389
BSNT_00021___ 384 --------TTTTATGAAACATTTATTCGGACAATCGGATATAGTAGATGA 425
|||| .||.||||.||| ||.||| ||||||
BL02362___yaa 390 CAGGTCCCTTTT-----CCAATTATCCGG---ATTGGA------AGATGA 425
BSNT_00021___ 426 ACGGTATACCATGAAAAAATTATTAATGGC---CATTCCAGAACTTAGCG 472
|||.|..|..|||||..|..|.| |||| .|||||.|| |
BL02362___yaa 426 ACGATTCAATATGAAGCAGCTTT---TGGCGAGAATTCCGGA-------G 465
BSNT_00021___ 473 AT--ATTTTCTAC-----TTTCAGCAGAAAGAACGATTTATGACAAAAGT 515
|| ||....||| ||||| .||||| |.|||.| .|||.|||
BL02362___yaa 466 ATCAATAAAGTACTGGCATTTCA-AAGAAA-ACCGAAT----CCAATAGT 509
BSNT_00021___ 516 TGAGAAGGA------TAAGAACG----AAATTTTTG--TACCGGAGGAAG 553
|.|||.| .||||.|| | |||| |.||
BL02362___yaa 510 --AAAAGCAGCCGTCGAAGACCGGCTCA----TTTGGCTGCC-------- 545
BSNT_00021___ 554 TAGTAATCAA------------TTACAAAATGTCTGATTCAA--GGTTTG 589
||.|.| ||||||.||||| .|||| .||||.
BL02362___yaa 546 ----AAGCGAGACGCCCGATGCTTACAATATGTC---GTCAAAGCGTTTC 588
BSNT_00021___ 590 CT-GAATACATGTCCCAT--CATTATCAA-TGGTCTTT-TAC----AAAA 630
.| || |||||||..|| |||| |.|| |||||||| |.| ||.|
BL02362___yaa 589 ATCGA--ACATGTCGAATACCATT-TAAACTGGTCTTTCTGCCGTGAAGA 635
BSNT_00021___ 631 AAAAATGAACACGGGCTGCTGTTCGAAATTT----CACCACAAGACAAGG 676
|||| || ||| |.|| |||| |.||.|...|.|||.
BL02362___yaa 636 AAAA--GA----GGG-----GATC---ATTTTTTCCGCCGCTCAAAAAGA 671
BSNT_00021___ 677 A-GCCAT----GGACATCGACCAGC-----TTATTGTTTG--ACATGGAA 714
| |||.| |.||.|||||.|.| ||||..|||| ||||||
BL02362___yaa 672 ATGCCGTCCCAGCACTTCGACTACCTTGCTTTATGATTTGGAACATGG-- 719
BSNT_00021___ 715 AAGAACCAATATTATATCCCTTCTCAAAGGGAGCAATTTCTGAGGCTTCC 764
|..|||||||.|.||..||.||.||||.|..|||.|.|.|||.||
BL02362___yaa 720 -----CGCATATTATTTTCCGGCTGAACGGGATCGCTTTTTAAAGCTCCC 764
BSNT_00021___ 765 CGAAATGACAATT----CATTATTTGATTTTGTACAACGTTGGGATGATT 810
.||||| ||| |||||.|||.||...|||||..|..|.||||||
BL02362___yaa 765 GGAAAT----ATTGGTGCATTACTTGGTTGCTTACAATTTAAGCATGATT 810
BSNT_00021___ 811 GCAAGGTATGAAACAGAATGGTGGTATGA----GTTATTAACA----CAG 852
||.|||||||||||||||||||||||||| .||.||.|.| |||
BL02362___yaa 811 GCCAGGTATGAAACAGAATGGTGGTATGACCTTCTTCTTCAAAGTGCCAG 860
BSNT_00021___ 853 CATATAAGTGATGACTACGTGTTAATTCAGCAGTTTTTA---TTAGTAAC 899
| |||||.||.||..|.||.||.||||||||| .||||
BL02362___yaa 861 C--------GATGATTATGTCATCATCCAACAGTTTTTACATATAGT--- 899
BSNT_00021___ 900 AGA---AAAGAAATTCCCTAAATA---CGCTTCACAGTTTCTTCTTCATT 943
.|| |||| ||||||.|.|| |||| .|.||.|||.|||
BL02362___yaa 900 CGAGTCAAAG---TTCCCTTATTATATCGCT---GAATTGCTTATTC--- 940
BSNT_00021___ 944 TTTAA----------------------------------- 948
.||
BL02362___yaa 941 --GAAAAAAAGAAAACAACAAAAAAGACCAGCTTATATAA 978
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