Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00032 and BL02367
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_00032___dgk.1.5803.seq
# -bsequence dna-align/BL02367___dgk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00032___dgk-BL02367___dgk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00032___dgk-BL02367___dgk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00032___dgk
# 2: BL02367___dgk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 672
# Identity: 442/672 (65.8%)
# Similarity: 442/672 (65.8%)
# Gaps: 96/672 (14.3%)
# Score: 1426.5
#
#
#=======================================
BSNT_00032___ 1 ATGAATACAGCCCCTTTTATTGCAATAGAAGGTCCTATCGGGGCAGGAAA 50
|||||||||||||||||.|||||..|.|||||.||.|||||.||.|||||
BL02367___dgk 1 ATGAATACAGCCCCTTTCATTGCTGTCGAAGGCCCCATCGGCGCGGGAAA 50
BSNT_00032___ 51 AACAACTCTCGCAACGATGCTCTCACAAGAATTCGGATTCCCTATGATCA 100
||||||..|.||.|..||||||||..||.|..||..|.||.||.||.|||
BL02367___dgk 51 AACAACCTTGGCCAGCATGCTCTCCGAAAAGCTCTCACTCTCTTTGGTCA 100
BSNT_00032___ 101 ATGAGATTGTAGAGGATAACCCGTACCTTGATAAGTTTTATGACAATATA 150
|.||.||.||.||.||.|||||.|..||||||||.||||||||..|.|.|
BL02367___dgk 101 AAGAAATCGTCGAAGAAAACCCTTTTCTTGATAAATTTTATGATGAAAAA 150
BSNT_00032___ 151 GAGGAATGGAGCTTCCAGCTCGAGATGTTTTTTCTTTGTCACAGATACAA 200
||.|||||||||||.|||||.|||||||||||.||.||..|..|.||.||
BL02367___dgk 151 GATGAATGGAGCTTTCAGCTTGAGATGTTTTTCCTCTGCAATCGCTATAA 200
BSNT_00032___ 201 ACAGCTTGAAGACACC-AGTGATCACTTTTTAAAAAAG-----------G 238
.|||||||||||.||| || |||||| .
BL02367___dgk 201 GCAGCTTGAAGATACCGAG-------------AAAAAGTATTTGCATCAT 237
BSNT_00032___ 239 GACA-GCCTGTAATAGCTGATTATCATATTTATAAAAATGTGATTTTTGC 287
.||| |||.||..|..|.||.|||||||||||||||||..|.||||||||
BL02367___dgk 238 CACATGCCCGTTGTTTCGGACTATCATATTTATAAAAACCTCATTTTTGC 287
BSNT_00032___ 288 GGAACGCACCTTGTCTCCACATCAGCTGGAA---------------AAAT 322
.|||||.|| ||||||| ||||
BL02367___dgk 288 CGAACGGAC---------------GCTGGAAGGCAAAAAACTTGAGAAAT 322
BSNT_00032___ 323 ACAAAAAGATATATCACCTGCTAACGGATGATCTGCCAAAGCCGAATTTC 372
|||.|||.||.|||||.|||||.||.||.||||||||.||.||.||..||
BL02367___dgk 323 ACAGAAAAATTTATCAGCTGCTTACAGAAGATCTGCCGAAACCAAACGTC 372
BSNT_00032___ 373 ATCATTTACATAAAGGCCAGTCTGCCTACATTGCTACACCGCATTGAAAA 422
|||||||||||||..||.|||||.||.||.||..|..|.||.||..||||
BL02367___dgk 373 ATCATTTACATAAGAGCGAGTCTTCCAACTTTATTGGAACGGATCAAAAA 422
BSNT_00032___ 423 ACGCGGGCGCCCCTTTGAGAAAAAAATTGAAACTAGC--TATTTGGAGCA 470
||||||.||.||.|||||..||.||||.| ||.||| ||..||||.||
BL02367___dgk 423 ACGCGGACGGCCGTTTGAACAAGAAATGG--ACAAGCAATACCTGGAACA 470
BSNT_00032___ 471 GCTGATTTCA--GATTATGAAGTCGCCATCAAGCAGCTGCAGGAAGCAGA 518
||| |.||| ||||||||.|..|||||.|||||..|..|.|||.|.||
BL02367___dgk 471 GCT--TATCAATGATTATGAGGCGGCCATTAAGCAATTTAAAGAATCCGA 518
BSNT_00032___ 519 CCCTG--AACTTA-----CAGTG---TTAACCGTAGAT--GGTGATTCAA 556
.|| | || || ||.|| |||| ||.|||| ||
BL02367___dgk 519 TCC-GCCAA--TACCCGTCATTGAAATTAA-CGGAGATCAGG-------- 556
BSNT_00032___ 557 AGGATTTCGTTTTGAAT---AAGAGCGACTTTGAA-CGCATTGCCGCCCA 602
|.||.||||| ||| |..|||...|||.|| ||.|||||||..||
BL02367___dgk 557 AAGACTTCGT----AATCTCAGAAGCCGTTTTCAATCGAATTGCCGATCA 602
BSNT_00032___ 603 TGTAAAGGAGCTTATCGTATGA 624
.|||||||||..|||.|.||||
BL02367___dgk 603 AGTAAAGGAGTATATAGAATGA 624
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