Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06200 and BL02371
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence dna-align/BSNT_06200___yycF.1.5803.seq
# -bsequence dna-align/BL02371___yycF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06200___yycF-BL02371___yycF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06200___yycF-BL02371___yycF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06200___yycF
# 2: BL02371___yycF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 719
# Identity: 562/719 (78.2%)
# Similarity: 562/719 (78.2%)
# Gaps: 19/719 ( 2.6%)
# Score: 2202.5
#
#
#=======================================
BSNT_06200___ 1 ATGATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGA 50
|||||.||||||||.||.||.||||||||||||||.||||||||.||
BL02371___yyc 1 ---ATGGAAAAAAAGATACTAGTTGTAGATGATGAAAAGCCGATTGCTGA 47
BSNT_06200___ 51 TATATTGGAATTTAA-CTTAAGAAAAGAAGGCTATGAAGTGCACTGTGCC 99
|||.||.||.||||| ||.|| ||||||.|||||||||||.||.||.||.
BL02371___yyc 48 TATTTTAGAGTTTAATCTGAA-AAAAGAGGGCTATGAAGTCCATTGCGCA 96
BSNT_06200___ 100 CATGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTT 149
.|.|||||.||.|||||..||.|.|||||.||.||.||..|.||||||.|
BL02371___yyc 97 TACGACGGCAATGAAGCGCTTCAGATGGTTGAGGATCTCAACCCTGATAT 146
BSNT_06200___ 150 AATTCTTTTAGATATTATGCTCCCGAATAAAGACGGCGTTGAGGTATGCC 199
.|||||..|.||.||.|||||.||||||||||||||.||.||.||.||||
BL02371___yyc 147 GATTCTGCTCGACATCATGCTTCCGAATAAAGACGGTGTGGAAGTGTGCC 196
BSNT_06200___ 200 GTGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTGACGGCTAAG 249
||||||||.|.||.|||||.||||||||.||||||||||||||.||.|||
BL02371___yyc 197 GTGAAGTCCGCAAAAAATATGATATGCCCATCATTATGCTGACAGCAAAG 246
BSNT_06200___ 250 GATTCAGAAATTGACAAGGTTATCGGGCTCGAAATCGGTGCTGATGACTA 299
|||||.|||||.||.||.||.|||||.||.|||.|.||.|||||.||.||
BL02371___yyc 247 GATTCGGAAATCGATAAAGTCATCGGCCTTGAACTGGGCGCTGACGATTA 296
BSNT_06200___ 300 TGTCACAAAACCATTCAGCACACGCGAGCTCTTGGCGCGTGTAAAAGCGA 349
|||.||||||||.||||||||.|||||.||..||||||||||.|||||||
BL02371___yyc 297 TGTGACAAAACCGTTCAGCACCCGCGAACTGCTGGCGCGTGTCAAAGCGA 346
BSNT_06200___ 350 ACCTGCGCCGCCAGCTGACA----ACAGCG---CCTGCGGAGGAAGAGCC 392
||||| ||..|||| |||||| |||||.||.|||||..|
BL02371___yyc 347 ACCTG-------AGAAGACAGAACACAGCGGCTCCTGCCGAAGAAGAATC 389
BSNT_06200___ 393 TTCCTCTAACGAGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGT 442
.||.||.|||||.|||||.|||||.||.||||||||.||.||.||.||.|
BL02371___yyc 390 GTCTTCAAACGAAATTCAAATCGGATCGCTCGTCATTTTTCCGGATGCCT 439
BSNT_06200___ 443 ACGTTGTATCAAAACGAGATGAAACAATCGAATTGACTCATCGTGAGTTC 492
|.||.||.||||||||.||.||.||||||||..||||.|||||.||.|||
BL02371___yyc 440 ATGTCGTTTCAAAACGCGACGAGACAATCGAGCTGACACATCGGGAATTC 489
BSNT_06200___ 493 GAATTGCTTCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGA 542
|||.||||.|||||..|.||||||||||||||.|||||.|||||.|||||
BL02371___yyc 490 GAACTGCTGCATTACCTTGCAAAACATATCGGGCAAGTCATGACGCGTGA 539
BSNT_06200___ 543 ACATTTGCTTCAAACCGTTTGGGGCTATGATTACTTCGGCGATGTCAGAA 592
||||.|.||.||||||||.|||||.||.||.|||||.||.||||||.|.|
BL02371___yyc 540 ACATCTTCTGCAAACCGTGTGGGGATACGACTACTTTGGGGATGTCCGGA 589
BSNT_06200___ 593 CGGTTGACGTAACAGTCCGCCGGCTTCGTGAAAAAATCGAGGACAACCCG 642
|.||||||||.||.||..|.||.|||||.||||||||||||||.||.|||
BL02371___yyc 590 CAGTTGACGTTACGGTTAGACGCCTTCGCGAAAAAATCGAGGATAATCCG 639
BSNT_06200___ 643 AGCCATCCAAATTGGATCGTCACACGCCGCGGTGTAGGTTATTACTTGAG 692
||.||.||||..||||||||.|||.|.||||||||.||.||.||.|||||
BL02371___yyc 640 AGTCACCCAAGCTGGATCGTTACAAGGCGCGGTGTCGGCTACTATTTGAG 689
BSNT_06200___ 693 AAACCCAGAACAGGACTAA 711
|||.||.||||||||||||
BL02371___yyc 690 AAATCCGGAACAGGACTAA 708
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