Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06196 and BL02375

See Amino acid alignment / Visit BSNT_06196 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence dna-align/BSNT_06196___yycJ.1.5803.seq
#    -bsequence dna-align/BL02375___yycJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06196___yycJ-BL02375___yycJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06196___yycJ-BL02375___yycJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06196___yycJ
# 2: BL02375___yycJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 797
# Identity:     637/797 (79.9%)
# Similarity:   637/797 (79.9%)
# Gaps:           4/797 ( 0.5%)
# Score: 2550.5
# 
#
#=======================================

BSNT_06196___      1 ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTT     50
                     ||||||.|||||||||||||||||||||||||||||||.||.|||||.||
BL02375___yyc      1 ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTT     50

BSNT_06196___     51 TTACCTTGAAACAGAGGATCACGCATTTTTAGTGGACGCCGGTTTGAGCG    100
                     .||..|.|||||.||.||.|||||.||||||||.|||||.||..|.||||
BL02375___yyc     51 ATATTTGGAAACCGATGACCACGCTTTTTTAGTTGACGCAGGACTTAGCG    100

BSNT_06196___    101 GGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGAT    150
                     ||||.||.|||||.||||||||||||||.||.|..||.|||||.|||.|.
BL02375___yyc    101 GGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAG    150

BSNT_06196___    151 GTAGACGGCATTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCT    200
                     .|.||||||||.|||||.||.||||||||.|||||||||||.||.||.||
BL02375___yyc    151 CTCGACGGCATCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCT    200

BSNT_06196___    201 TGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCGAATGAGAAGA    250
                     |||.|||.|.||.|||||.||..||||.||..|.||.||.|||||.||.|
BL02375___yyc    201 TGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCCAATGAAAAAA    250

BSNT_06196___    251 CTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAG    300
                     |.|||||.||||||||....||.|||||.|||||.||.|.||..||||||
BL02375___yyc    251 CGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAG    300

BSNT_06196___    301 TTTGTATTTCCGATGGAAACAGTGAAGTCGTTCGGCGGACTTGATGTTGA    350
                     ||.||.|||||.||||||||.||.|||||.||||||...||||||||.||
BL02375___yyc    301 TTCGTTTTTCCAATGGAAACCGTCAAGTCATTCGGCTCCCTTGATGTCGA    350

BSNT_06196___    351 ATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC    400
                     |||.||.||.||.|||||.|||||.||.||||||||||||||.||.||.|
BL02375___yyc    351 ATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC    400

BSNT_06196___    401 ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGC    450
                     ||||.||.||||||||||||||.||.||.||.||||||||.|||||||||
BL02375___yyc    401 ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGC    450

BSNT_06196___    451 GACCGGATGAAAGGCATTATCCGTTCAGCGAATGTGTTTGTGTTTGAAAG    500
                     |||.|.|||||||||||.|||||.||.||.||.|..|||||.||||||||
BL02375___yyc    451 GACAGAATGAAAGGCATCATCCGCTCGGCAAACGCTTTTGTTTTTGAAAG    500

BSNT_06196___    501 CAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTA    550
                     ||||||||||||||||||||||||||||||..|.||.|||||||.|||.|
BL02375___yyc    501 CAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCA    550

BSNT_06196___    551 AGCGGCGGATTTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCC    600
                     ||||.||||||.||||.||||||||.|||||.||.|||||.||.||.||.
BL02375___yyc    551 AGCGCCGGATTCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCA    600

BSNT_06196___    601 TTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTATTTACCTGGC    650
                     .|.||.|||||.|||||.||.|||.|||||||.||..|.|||||..||||
BL02375___yyc    601 CTCGCAATGACCGATGTAATCGGCAATGAGACATCGAGAATTTATTTGGC    650

BSNT_06196___    651 GCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGC    700
                     .|||||.||||||||||||||||||||.||||||||||||||||||||||
BL02375___yyc    651 TCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCAAGAATGTCTGTGC    700

BSNT_06196___    701 AGCAGACATTGGCTTCTAAAGGATTTGTGACGGGTGAGACATTTGACTTA    750
                     ||||.||..|||||.|.||||||||||.|.|.||.||.||.|||||||||
BL02375___yyc    701 AGCAAACGCTGGCTGCCAAAGGATTTGCGGCAGGAGAAACGTTTGACTTA    750

BSNT_06196___    751 TACGACACCGATCCGAAGAAGGCCACTCCGCT--TTGCGCTGTATAA    795
                     ||.||.||||||||.|||||..|.||.||.||  |.|||.||||.  
BL02375___yyc    751 TATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA--    795


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