Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06172 and BL02382
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_06172___yydA.1.5803.seq
# -bsequence dna-align/BL02382___yydA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06172___yydA-BL02382___yydA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06172___yydA-BL02382___yydA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06172___yydA
# 2: BL02382___yydA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 407/482 (84.4%)
# Similarity: 407/482 (84.4%)
# Gaps: 4/482 ( 0.8%)
# Score: 1730.0
#
#
#=======================================
BSNT_06172___ 1 GTGAATATCAAT--ATTGTGACAATCGGAAAACTAAAAGAAAAATACCTC 48
|||||||| || ||.||..|||||||||||||||||||||||||..|.
BL02382___yyd 1 GTGAATAT--ATCAATCGTAGCAATCGGAAAACTAAAAGAAAAATATTTA 48
BSNT_06172___ 49 AAACAAGGCATTGAAGAATACACCAAACGACTTTCGGCCTACGCAAAAAT 98
||||||||.||.||.|||||||..|||||.||||||||.|||||||||.|
BL02382___yyd 49 AAACAAGGAATCGATGAATACATAAAACGGCTTTCGGCATACGCAAAAGT 98
BSNT_06172___ 99 CGACATCATCGAACTCCCGGACGAAAAAGCGCCGGAAAACCTAAGCGACC 148
|||||||||||||||.||||||||||||||.|||||||||||||||||||
BL02382___yyd 99 CGACATCATCGAACTTCCGGACGAAAAAGCACCGGAAAACCTAAGCGACC 148
BSNT_06172___ 149 AGGACATGAAAATCATAAAAGACAAAGAAGGCGACCGCATCCTATCAAAA 198
||||||||||||||.|.|||||||||||||||||.||.||.||.||.|||
BL02382___yyd 149 AGGACATGAAAATCGTCAAAGACAAAGAAGGCGAACGAATTCTCTCCAAA 198
BSNT_06172___ 199 ATCAGCCCCGACGCCCACGTCATCGCCCTCGCCATCGAAGGAAAAATGAA 248
||||||||.||||||||||||||||||||.||.|||||||||||||||||
BL02382___yyd 199 ATCAGCCCAGACGCCCACGTCATCGCCCTGGCGATCGAAGGAAAAATGAA 248
BSNT_06172___ 249 AACATCCGAAGAACTAGCCGATACAATAGATAAGCTGGCGACATATGGAA 298
||..||.||||||.|||||||||..||.||||..||.||.||||||||||
BL02382___yyd 249 AAGTTCGGAAGAATTAGCCGATAATATGGATAGACTCGCCACATATGGAA 298
BSNT_06172___ 299 AAAGCAAAGTCACCTTCGTCATCGGCGGATCACTCGGATTGAGCGACGCG 348
|.|||||.|..|||||||||||||||||.||.|||||.||.||||||||.
BL02382___yyd 299 AGAGCAAGGCAACCTTCGTCATCGGCGGCTCGCTCGGCTTAAGCGACGCC 348
BSNT_06172___ 349 GTAATGAAGCGAGCGGATGAGAAGCTGTCATTCTCGAAAATGACGTTCCC 398
||..|||||||.||.||||||||||||||.||.||....|||||||||||
BL02382___yyd 349 GTCCTGAAGCGCGCAGATGAGAAGCTGTCGTTTTCACGGATGACGTTCCC 398
BSNT_06172___ 399 TCATCAGTTGATGCGGCTCATACTAGTGGAGCAGATTTATCGGGCTTTTC 448
.||||||.|||||.|.||.||..|..|.||||||.||||||||||||||.
BL02382___yyd 399 GCATCAGCTGATGAGACTGATTTTGCTCGAGCAGGTTTATCGGGCTTTTA 448
BSNT_06172___ 449 GGATTAATCGTGGGGAACCGTATCACAAATAG 480
||||||||||.|||||||||||.||.||||||
BL02382___yyd 449 GGATTAATCGAGGGGAACCGTACCATAAATAG 480
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