Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04482 and BL02406
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:40
# Commandline: needle
# -asequence dna-align/BSNT_04482___menB.1.5803.seq
# -bsequence dna-align/BL02406___menB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04482___menB-BL02406___menB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04482___menB-BL02406___menB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04482___menB
# 2: BL02406___menB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity: 661/822 (80.4%)
# Similarity: 661/822 (80.4%)
# Gaps: 9/822 ( 1.1%)
# Score: 2654.5
#
#
#=======================================
BSNT_04482___ 1 ATGGCT---GAATGGAAAACAAAACGGACATACGATGAGATATTGTATGA 47
|||.|| ||||||||||...||||...||||||.||..||||.|||||
BL02406___men 1 ATGACTGTAGAATGGAAAAGCGAACGTCAATACGAAGATGTATTATATGA 50
BSNT_04482___ 48 AACGTATAATGGCATTGCAAAAATAACAATCAACCGACCTGAGGTACATA 97
|||.|||||.|||||.||.|||||.||.|||||.||.|||||||||||||
BL02406___men 51 AACATATAACGGCATCGCCAAAATCACGATCAATCGCCCTGAGGTACATA 100
BSNT_04482___ 98 ATGCGTTTACCCCTAAAACGGTTGCTGAAATGATTGATGCGTTTGCTGAC 147
|.||.|||...||.|||||||||.|.|||.||||.|||||||||||..|.
BL02406___men 101 ACGCATTTCGTCCAAAAACGGTTTCAGAACTGATCGATGCGTTTGCATAT 150
BSNT_04482___ 148 GCAAGAGACGA--CCAA-AACGTTGGGGTTATCGTGCTTGCCGGTGCAGG 194
||..|.||.|| |||| |.||.||...||||| |||||.|||||.||
BL02406___men 151 GCGCGGGATGATGCCAATATCGGTGTCATTATC---CTTGCAGGTGCCGG 197
BSNT_04482___ 195 GGACAAGGCATTTTGTTCTGGCGGAGACCAAAAAGTGCGCGGCCACGGTG 244
|||.||.||.||.|||||.||.||||||||.|||||..|.||.|||||.|
BL02406___men 198 GGATAAAGCGTTCTGTTCAGGAGGAGACCAGAAAGTAAGGGGACACGGAG 247
BSNT_04482___ 245 GATATGTAGGAGACGACCAGATCCCGCGTCTTAACGTATTGGATCTTCAG 294
|.|||||.||.||.|||.||||.||||||.|.||.||..|.|||||||||
BL02406___men 248 GCTATGTCGGTGAAGACGAGATTCCGCGTTTGAATGTGCTTGATCTTCAG 297
BSNT_04482___ 295 CGTTTAATCCGCGTCATCCCGAAACCGGTTGTTGCGATGGTGTCCGGATA 344
||..|.|||||||||||.|||||.||.|||||.|||||||||||.||.||
BL02406___men 298 CGGCTGATCCGCGTCATTCCGAAGCCTGTTGTAGCGATGGTGTCAGGCTA 347
BSNT_04482___ 345 TGCGATTGGCGGAGGCCATGTGCTTCACATCGTATGTGACTTGACAATTG 394
||||||.|||||.|||||||||||.|||.|||||||.||.|||||.||||
BL02406___men 348 TGCGATCGGCGGCGGCCATGTGCTCCACGTCGTATGCGATTTGACGATTG 397
BSNT_04482___ 395 CTGCGGACAACGCAATTTTTGGACAAACAGGCCCTAAAGTTGGAAGCTTC 444
|||||||||||||.|||||.|||||||||||.||.|||||.||.|||||.
BL02406___men 398 CTGCGGACAACGCGATTTTCGGACAAACAGGGCCGAAAGTCGGCAGCTTT 447
BSNT_04482___ 445 GATGCAGGTTACGGTTCTGGCTACCTGGCTCGAATTGTAGGACATAAAAA 494
|||||.||.|||||.||.|||||.|||||.||.||.||.|||||||||||
BL02406___men 448 GATGCGGGCTACGGATCAGGCTATCTGGCGCGTATCGTCGGACATAAAAA 497
BSNT_04482___ 495 AGCACGTGAAATCTGGTACCTATGCCGTCAGTACAACGCACAGGAAGCAC 544
|||.||.|||||||||||.||.|||||||||||||||||.|||||||||.
BL02406___men 498 AGCGCGCGAAATCTGGTATCTGTGCCGTCAGTACAACGCTCAGGAAGCAA 547
BSNT_04482___ 545 TGGACATGGGTCTTGTCAACACAGTCGTTCCTTTGGAACAGCTTGAAGAA 594
..||.|||||.||||||||.||.||.||.||..|.|||.|||||||||||
BL02406___men 548 AAGAAATGGGCCTTGTCAATACGGTTGTACCGCTTGAAAAGCTTGAAGAA 597
BSNT_04482___ 595 GAAACGATTAAATGGTGTGAAGAAATGCTTGAAAAAAGCCCGACCGCACT 644
||||||||||||||||||||||||||||||||.|||||||||||.|||||
BL02406___men 598 GAAACGATTAAATGGTGTGAAGAAATGCTTGAGAAAAGCCCGACAGCACT 647
BSNT_04482___ 645 GCGCTTTCTTAAAGCTGCGTTTAACGCGGACACAGACGGACTTGCTGGAA 694
..|.||.||||||||.||.||||||||.||.||.|||||.|||||.||.|
BL02406___men 648 CAGATTCCTTAAAGCGGCCTTTAACGCCGATACGGACGGGCTTGCCGGCA 697
BSNT_04482___ 695 TTCAGCAGTTTGCAGGGGATGCTACCCTTCTTTACTACACAACAGATGAA 744
|.|||||||||||.||.|||||.||.||.|||||.|||||||||||||||
BL02406___men 698 TCCAGCAGTTTGCCGGAGATGCGACACTGCTTTATTACACAACAGATGAA 747
BSNT_04482___ 745 GCAAAAGAAGGCCGTGATTCCTTTAAGGAAAAACGCAAACCTGATTTCGG 794
||.|||||||||||.|||.|.|||||.|||||||||...||.||.|||||
BL02406___men 748 GCGAAAGAAGGCCGCGATGCGTTTAAAGAAAAACGCCGTCCAGACTTCGG 797
BSNT_04482___ 795 ACAGTTCCCTCGTTTCCCGTGA 816
|||||||||.|||||.||.|.|
BL02406___men 798 ACAGTTCCCGCGTTTTCCTTAA 819
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