Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03883 and BL02429
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03883___cypA.1.5803.seq
# -bsequence dna-align/BL02429___cypA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03883___cypA-BL02429___cypA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03883___cypA-BL02429___cypA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03883___cypA
# 2: BL02429___cypA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1248
# Identity: 936/1248 (75.0%)
# Similarity: 936/1248 (75.0%)
# Gaps: 27/1248 ( 2.2%)
# Score: 3422.0
#
#
#=======================================
BSNT_03883___ 1 ATGTCTTCAAAAGAAAAAAATAGTGTAACCATTTTGACGGAAAGTCAATT 50
||||||||||||.||.|..|.||..|..||||.||.||.||.||..||||
BL02429___cyp 1 ATGTCTTCAAAACAAGAGGAGAGCTTCGCCATATTAACTGAGAGAGAATT 50
BSNT_03883___ 51 GTCTTCGAGAGCATTTAAAGATGAAGCGTATGAATTTTATAAAGAATTGC 100
||||||...|||||||||||||||.||||||||||||||.||...|||.|
BL02429___cyp 51 GTCTTCTGCAGCATTTAAAGATGAGGCGTATGAATTTTACAAGCGATTAC 100
BSNT_03883___ 101 GAAAATCACAGCCTCTCTACCCATTATCTTTAGGAGCTCTGGGGAAAGGC 150
|....||.|..|||.|||..||..||||..|.||.|..|||||..|||||
BL02429___cyp 101 GCGCTTCCCGTCCTGTCTGTCCCGTATCGATGGGGGAGCTGGGCGAAGGC 150
BSNT_03883___ 151 TGGCTCATATCGAGATATGAAGATGCAATACATTTATTAAAGAATGAAAA 200
||||||||..||||.||.||.|||||..|.|||.||||||||.|||.||.
BL02429___cyp 151 TGGCTCATTACGAGGTACGATGATGCGGTCCATATATTAAAGGATGCAAG 200
BSNT_03883___ 201 ATTAAAGAAAAACTATGAAAATGTATTTACCGCAAAAGA-----AAAACG 245
|.|.||.|||||.||.|||||||..|||||||.|.|||| |.|||.
BL02429___cyp 201 AGTGAAAAAAAATTACGAAAATGCGTTTACCGAAGAAGAATTAGAGAACT 250
BSNT_03883___ 246 TC-CTGCTCTATTGAAGAATGAAGAGTCTTTAACAAAGCATATGCTTAAT 294
|| |.|||| ||.|.||||||||..|||||.|||||||||||||.||.
BL02429___cyp 251 TCTCCGCTC---TGGAAAATGAAGAACCTTTATCAAAGCATATGCTCAAC 297
BSNT_03883___ 295 TCAGATCCCCCTGATCACAACCGCTTGCGAACTCTTGTTCAAAAAGCATT 344
.||||||||||.||.|||..|||.|||||..||||||||||.||||||||
BL02429___cyp 298 GCAGATCCCCCCGACCACGGCCGTTTGCGGTCTCTTGTTCAGAAAGCATT 347
BSNT_03883___ 345 TACGCATCGGATGATTTTCCAGTTGGAAGACAAAATCCAGCATATCGCAG 394
|||.|..||||||.||||.|||.|.|||.|||.||||||..|.||.||.|
BL02429___cyp 348 TACTCCCCGGATGGTTTTACAGCTCGAAAACAGAATCCAAAAAATAGCTG 397
BSNT_03883___ 395 ATTCTTTATTGGATAAAGTGCAGCCCAACAAATTCATGAACCTAGTAGAC 444
||||.|||||||||.||||..|.||.||..|.|.||||||.||.||||||
BL02429___cyp 398 ATTCCTTATTGGATCAAGTAGAACCGAATCATTCCATGAATCTTGTAGAC 447
BSNT_03883___ 445 GATTATGCGTTTCCATTGCCGATTATCGTGATAAGTGAAATGCTTGGCAT 494
||.|..||.||.||..|||||||.||.||.||.||.||.||||||||.||
BL02429___cyp 448 GACTTCGCTTTCCCGCTGCCGATCATTGTCATCAGCGAGATGCTTGGTAT 497
BSNT_03883___ 495 TCC-CTTGGAAGATCGTCAAAAATTCAGAGTGTGGTCACAAGCAATTATT 543
||| ||| ||||||||.||||||||||||||.|||||.||.||..|||||
BL02429___cyp 498 TCCGCTT-GAAGATCGGCAAAAATTCAGAGTTTGGTCCCAGGCGGTTATT 546
BSNT_03883___ 544 GATTTTTCAGATGCCCCTGAAAGACTTCAGGA-GAATGACCACTTGT--- 589
||||||||.||..|.||.|||||.|| ||| |||| ||..||
BL02429___cyp 547 GATTTTTCTGACACGCCCGAAAGCCT---GGAGGAAT----ACAAGTATA 589
BSNT_03883___ 590 ---TAGGAGAATTTGTTGAATATTTGGAATCCTTAGTTCGCAAAAAAAGG 636
||||.|||||.|.||||||..||||||..||.||.||||||||||||
BL02429___cyp 590 AAATAGGCGAATTCGCTGAATACCTGGAATATTTGGTACGCAAAAAAAGG 639
BSNT_03883___ 637 AGCGAACCTTCAGGAGATTTAATCAGTGCATTAATTCAAGCGGAAAGTGA 686
..|||.||..|.|..||||||.||||||||||||||||.||.|||||.||
BL02429___cyp 640 GACGAGCCGGCTGAGGATTTAGTCAGTGCATTAATTCAGGCAGAAAGCGA 689
BSNT_03883___ 687 AGGCACACAATTAAGTACAGAAGAATTGTACTCGATGATTATGCTGCTTA 736
|||.||..|||||||.|.||||||..||||..|||.|||||||||.||||
BL02429___cyp 690 AGGAACGAAATTAAGCATAGAAGAGCTGTATGCGACGATTATGCTTCTTA 739
BSNT_03883___ 737 TCGTTATAGGTCATGAAACAACCGTAAACTTAATCACCAATATGACCTAT 786
||||...|||.|||||.|||||.|||||||||||.|||||||||||||..
BL02429___cyp 740 TCGTCGCAGGACATGAGACAACGGTAAACTTAATAACCAATATGACCTTG 789
BSNT_03883___ 787 GCTCTGATGTGTCACGGTGATCAATTAGAAAAGCTCCGCCAGCAGCCAGA 836
||..||.||...|||..|||.|||.|.||||||||.|||||..|..||||
BL02429___cyp 790 GCCTTGCTGAACCACCCTGAGCAACTGGAAAAGCTTCGCCAAAACGCAGA 839
BSNT_03883___ 837 CTTGATGAATTCAGCCATAGAAGAAGCATTGTGGTTTCACAGCCCTGTTG 886
.||.||..|.||||||||.|||||.||..|..|.|||.|||||||.||.|
BL02429___cyp 840 TTTAATCGACTCAGCCATTGAAGAGGCGCTCAGATTTTACAGCCCCGTGG 889
BSNT_03883___ 887 AGTTAACGACGATTCGCTGGACGGCTGAACCGTTTATGCTGCATGGACAG 936
|.|||||.||..|.||||||.||||.||||||||||...||||.||.|||
BL02429___cyp 890 AATTAACCACCCTCCGCTGGGCGGCCGAACCGTTTACATTGCACGGCCAG 939
BSNT_03883___ 937 GAGATTAAACGGAAAGATGTGATCATCATTTCTTTAGCATCAGCAAACCG 986
||||||||..|.|||||||||.||||||||||.|||||.||.||.|||||
BL02429___cyp 940 GAGATTAAGAGAAAAGATGTGGTCATCATTTCATTAGCCTCGGCCAACCG 989
BSNT_03883___ 987 TGATGAGAAGATATTTCCAAATGCCGACATATTTGATATTGAAAGAAAGA 1036
.|||.|.|.|.|.|||.|.|||||||||...||||||||||||||||||.
BL02429___cyp 990 CGATTATATGGTCTTTTCGAATGCCGACCGCTTTGATATTGAAAGAAAGG 1039
BSNT_03883___ 1037 ACAACCGCCATATTGCTTTTGGCCATGGCAATCATTTTTGCCTTGGTGCA 1086
|.||||||||..|.||.|||||||||||||..|||||||||||.||.|||
BL02429___cyp 1040 ATAACCGCCACCTAGCCTTTGGCCATGGCAGCCATTTTTGCCTGGGCGCA 1089
BSNT_03883___ 1087 CAGCTAGCCCGCTTAGAAGCAAAGATTGCGATTTCCACCTTATTACGCCG 1136
|.|||.|||||.||.|||||.||.||.||.|||...|||||..|.|||||
BL02429___cyp 1090 CCGCTTGCCCGATTGGAAGCCAAAATCGCCATTCAAACCTTGCTGCGCCG 1139
BSNT_03883___ 1137 CTGTCCAAATATACAGTTAAAAGGCGAAAAGGAACAAATAAAATGGAAAG 1186
||.|..|.|||||.||.|.||||||||||.|||.||.||.||||||||||
BL02429___cyp 1140 CTTTGAACATATAGAGATTAAAGGCGAAAGGGAGCAGATCAAATGGAAAG 1189
BSNT_03883___ 1187 GGAATTTTCTGATGAGAGCACTCGAAGAACTGCCGCTTA-GTTTTTAA 1233
|.||.|||.||||||||||..|.|||||.||||| .||| .|||||||
BL02429___cyp 1190 GCAACTTTTTGATGAGAGCTTTAGAAGAGCTGCC-ATTATCTTTTTAA 1236
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