Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05509 and BL02446
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence dna-align/BSNT_05509___ywrB.1.5803.seq
# -bsequence dna-align/BL02446___ywrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05509___ywrB-BL02446___ywrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05509___ywrB-BL02446___ywrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05509___ywrB
# 2: BL02446___ywrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity: 419/608 (68.9%)
# Similarity: 419/608 (68.9%)
# Gaps: 52/608 ( 8.6%)
# Score: 1378.5
#
#
#=======================================
BSNT_05509___ 1 ATGAAAAACCATCCTTATCGGGATATGACGGCCGCAATGGTTCGCACCGG 50
||| ||.||.|||||.|||||..|||....|||||||....|.||.||
BL02446___ywr 1 ATG---AAGCACCCTTACCGGGAACTGATCATCGCAATGACAAGAACGGG 47
BSNT_05509___ 51 CATATTAGGGTTCGGCGGCGGACCTTCCGTGATTCCGCTGATCCGCCATG 100
.|||||.||.||.||||||||.||.||.||.||.|||||||||||.||||
BL02446___ywr 48 AATATTGGGCTTTGGCGGCGGCCCATCTGTTATCCCGCTGATCCGTCATG 97
BSNT_05509___ 101 AAGCGGTCAATAAATATAAATGGATTGACGATGATGAATTCGGAGAAATA 150
||||.||...|||.|..||||||||.||.||||||||||||||.|||||.
BL02446___ywr 98 AAGCCGTTTCTAAGTTCAAATGGATCGATGATGATGAATTCGGGGAAATT 147
BSNT_05509___ 151 TTAGCAATCGCTAATGCGCTTCCCGGACCGATTGCCACCAAAATGGCTGC 200
||.||.||.||.||||||||.|||||.|||||.||.||.||||||.|.||
BL02446___ywr 148 TTGGCGATTGCCAATGCGCTGCCCGGGCCGATCGCTACGAAAATGTCGGC 197
BSNT_05509___ 201 TTATCT-GGGCTTTAAGCTAAAAGGCACAATAGGTGCAGTTGTGGCGACC 249
.|||.| ||.|.|.||| ||||||||......|||||.||.||.||.||.
BL02446___ywr 198 ATATTTAGGTCATAAAG-TAAAAGGCGTTCCTGGTGCTGTCGTTGCTACA 246
BSNT_05509___ 250 CTCGCCCACATTCTGCCTACATGTCTTGCGATGGTGGGCTTGTTTGCGGC 299
...|||||.||..||||.|||||....|||||||..|.||||||.||.||
BL02446___ywr 247 GCAGCCCATATCATGCCGACATGCGCCGCGATGGCCGCCTTGTTCGCAGC 296
BSNT_05509___ 300 TGTAAATGTGTTAAGCCATTCAGCAATTGT-TGCAGGTATGATTGGTGCT 348
.||.||||||.|.|||||.|||..|||.|| .|| ||.|||||.||.|||
BL02446___ywr 297 CGTTAATGTGCTCAGCCACTCAAAAATCGTAAGC-GGCATGATCGGCGCT 345
BSNT_05509___ 349 GTCACGCCGGTAATTGCGGTCATGCTCGGAATCATGGCGTACGAGTTTGG 398
|||||.||.||.||.||.|||||||||||.||||||||.|||||.|||||
BL02446___ywr 346 GTCACCCCTGTCATCGCCGTCATGCTCGGCATCATGGCTTACGAATTTGG 395
BSNT_05509___ 399 CCAAAAAGCGCTTAAAGGTTTCGGCTGGGTCACCGGTATCCTGTTTTTTA 448
.||||||||..|.|||||.|||||||.|.|.|||||..|.||.||.||||
BL02446___ywr 396 GCAAAAAGCATTGAAAGGCTTCGGCTTGCTGACCGGCGTGCTTTTCTTTA 445
BSNT_05509___ 449 TCATCGCTTTTATCGGCCTGCAA--ACTTTACAGATTAATCCCGGCCTTG 496
|..|.||.|||.|.||.||.||| ..|||.| ||..|.|||||| .
BL02446___ywr 446 TTCTTGCGTTTTTGGGTCTTCAAGTGTTTTCC--ATCCACCCCGGC---A 490
BSNT_05509___ 497 TCATTATCAT----TTTCTTAGCATACGGGGCGTTTCATTTTAAACTGAA 542
|||||.|||| ||| ||| ||| |||||| |.||
BL02446___ywr 491 TCATTGTCATCCTGTTT-TTA----ACG-----------TTTAAA-TTAA 523
BSNT_05509___ 543 AGACAAAATC------ACAAATAAACATTCAAAAGATAAAGGAATGTCAG 586
|.|.||||.| |.| |||.|||||||||.||||.|
BL02446___ywr 524 AAAGAAAAGCGGCCCGAGA-----------AAAGGATAAAGGAGTGTCCG 562
BSNT_05509___ 587 CCTCATGA 594
|.||||||
BL02446___ywr 563 CTTCATGA 570
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